Tiffany Tse, Yudan Chen, Mahsa Siadati, Yusi Miao, Jun Song, Da Ma, Zaid Mammo, Myeong Jin Ju
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While several multivolume registration algorithms have been developed to address this issue, they are often designed to cater to one specific OCT system or acquisition protocol.</p><p><strong>Aim: </strong>We aim to generate an OCT volume free of motion artifacts using a system-agnostic registration algorithm that is independent of system specifications or protocol.</p><p><strong>Approach: </strong>We developed a B-scan registration algorithm that removes motion and corrects for both translational eye movements and rotational angle differences between volumes. Tests were carried out on various datasets obtained from two different types of custom-built OCT systems and one commercially available system to determine the reliability of the proposed algorithm. Additionally, different system specifications were used, with variations in axial resolution, lateral resolution, signal-to-noise ratio, and real-time motion tracking. The accuracy of this method has further been evaluated through mean squared error (MSE) and multiscale structural similarity index measure (MS-SSIM).</p><p><strong>Results: </strong>The results demonstrate improvements in the overall contrast of the images, facilitating detailed visualization of retinal vasculatures in both superficial and deep vasculature plexus. Finer features of the inner and outer retina, such as photoreceptors and other pathology-specific features, are discernible after multivolume registration and averaging. Quantitative analyses affirm that increasing the number of averaged registered volumes will decrease MSE and increase MS-SSIM as compared to the reference volume.</p><p><strong>Conclusions: </strong>The multivolume registered data obtained from this algorithm offers significantly improved visualization of the retinal microvascular network as well as retinal morphological features. Furthermore, we have validated that the versatility of our methodology extends beyond specific OCT modalities, thereby enhancing the clinical utility of OCT for the diagnosis and monitoring of ocular pathologies.</p>","PeriodicalId":15264,"journal":{"name":"Journal of Biomedical Optics","volume":"29 6","pages":"066002"},"PeriodicalIF":3.0000,"publicationDate":"2024-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11091473/pdf/","citationCount":"0","resultStr":"{\"title\":\"Generalized 3D registration algorithm for enhancing retinal optical coherence tomography images.\",\"authors\":\"Tiffany Tse, Yudan Chen, Mahsa Siadati, Yusi Miao, Jun Song, Da Ma, Zaid Mammo, Myeong Jin Ju\",\"doi\":\"10.1117/1.JBO.29.6.066002\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><strong>Significance: </strong>Optical coherence tomography (OCT) has emerged as the standard of care for diagnosing and monitoring the treatment of various ocular disorders due to its noninvasive nature and <i>in vivo</i> volumetric acquisition capability. Despite its widespread applications in ophthalmology, motion artifacts remain a challenge in OCT imaging, adversely impacting image quality. While several multivolume registration algorithms have been developed to address this issue, they are often designed to cater to one specific OCT system or acquisition protocol.</p><p><strong>Aim: </strong>We aim to generate an OCT volume free of motion artifacts using a system-agnostic registration algorithm that is independent of system specifications or protocol.</p><p><strong>Approach: </strong>We developed a B-scan registration algorithm that removes motion and corrects for both translational eye movements and rotational angle differences between volumes. Tests were carried out on various datasets obtained from two different types of custom-built OCT systems and one commercially available system to determine the reliability of the proposed algorithm. 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引用次数: 0
摘要
意义重大:光学相干断层成像(OCT)因其无创性和活体容积采集能力,已成为诊断和监测治疗各种眼部疾病的标准。尽管其在眼科领域应用广泛,但运动伪影仍然是 OCT 成像中的一个难题,对图像质量产生了不利影响。目的:我们的目标是使用一种与系统无关的、不受系统规格或协议影响的配准算法生成无运动伪影的 OCT 容量:方法:我们开发了一种 B 扫描配准算法,该算法可消除运动并纠正眼球平移和容积间旋转角度的差异。我们对从两种不同类型的定制 OCT 系统和一种市售系统中获得的各种数据集进行了测试,以确定所提算法的可靠性。此外,还使用了不同的系统规格,包括轴向分辨率、横向分辨率、信噪比和实时运动跟踪。通过均方误差(MSE)和多尺度结构相似性指数测量(MS-SSIM)进一步评估了该方法的准确性:结果表明,图像的整体对比度有所提高,有助于详细观察浅层和深层血管丛中的视网膜血管。经过多容积配准和平均后,视网膜内、外层更精细的特征,如感光器和其他病理特异性特征也清晰可见。定量分析证实,与参考容积相比,增加平均登记容积的数量会降低 MSE,增加 MS-SSIM:结论:通过该算法获得的多体积注册数据可显著改善视网膜微血管网络和视网膜形态特征的可视化。此外,我们还验证了我们方法的多功能性超越了特定的 OCT 模式,从而提高了 OCT 在诊断和监测眼部病变方面的临床实用性。
Generalized 3D registration algorithm for enhancing retinal optical coherence tomography images.
Significance: Optical coherence tomography (OCT) has emerged as the standard of care for diagnosing and monitoring the treatment of various ocular disorders due to its noninvasive nature and in vivo volumetric acquisition capability. Despite its widespread applications in ophthalmology, motion artifacts remain a challenge in OCT imaging, adversely impacting image quality. While several multivolume registration algorithms have been developed to address this issue, they are often designed to cater to one specific OCT system or acquisition protocol.
Aim: We aim to generate an OCT volume free of motion artifacts using a system-agnostic registration algorithm that is independent of system specifications or protocol.
Approach: We developed a B-scan registration algorithm that removes motion and corrects for both translational eye movements and rotational angle differences between volumes. Tests were carried out on various datasets obtained from two different types of custom-built OCT systems and one commercially available system to determine the reliability of the proposed algorithm. Additionally, different system specifications were used, with variations in axial resolution, lateral resolution, signal-to-noise ratio, and real-time motion tracking. The accuracy of this method has further been evaluated through mean squared error (MSE) and multiscale structural similarity index measure (MS-SSIM).
Results: The results demonstrate improvements in the overall contrast of the images, facilitating detailed visualization of retinal vasculatures in both superficial and deep vasculature plexus. Finer features of the inner and outer retina, such as photoreceptors and other pathology-specific features, are discernible after multivolume registration and averaging. Quantitative analyses affirm that increasing the number of averaged registered volumes will decrease MSE and increase MS-SSIM as compared to the reference volume.
Conclusions: The multivolume registered data obtained from this algorithm offers significantly improved visualization of the retinal microvascular network as well as retinal morphological features. Furthermore, we have validated that the versatility of our methodology extends beyond specific OCT modalities, thereby enhancing the clinical utility of OCT for the diagnosis and monitoring of ocular pathologies.
期刊介绍:
The Journal of Biomedical Optics publishes peer-reviewed papers on the use of modern optical technology for improved health care and biomedical research.