棘皮动物超长链脂肪酸(Elovl)伸长基因的全基因组鉴定与比较分析

IF 0.6 4区 生物学 Q4 GENETICS & HEREDITY
M.-Y. Liu, Q.-C. Wang, J.-Q. Li, D. Zhang, J.-H. Mu, X.-H. Shen
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引用次数: 0

摘要

摘要极长链脂肪酸(Elovl)蛋白是催化长链多不饱和脂肪酸(LC-PUFAs)生物合成的关键限速酶。棘皮动物是再生研究和发育生物学等多个领域极为重要的研究对象。然而,迄今为止,棘皮动物中 Elovl 基因的全基因组特征和分析尚未得到研究。本研究利用生物信息学方法对 10 种具有代表性的棘皮动物中的 Elovl 基因进行了鉴定和分析。在所研究的棘皮动物中总共发现了 117 个 Elovl 基因。系统发生树显示,棘皮动物的所有 Elovl 基因可细分为 6 类,即 Elovl3 类、Elovl4 类、Elovl5 类、Elovl6 类、Elovl7 类和 Elovl8 类。此外,选择压力分析表明,棘皮动物中的 Elovl 基因主要受到强净化选择事件的限制。总之,本研究为棘皮动物的Elovl基因提供了分子基础,可为深入的系统发生学研究提供参考。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Genome-Wide Identification and Comparative Analysis of Elongation of Very Long-Chain Fatty Acid (Elovl) Genes in Echinoderms

Genome-Wide Identification and Comparative Analysis of Elongation of Very Long-Chain Fatty Acid (Elovl) Genes in Echinoderms

Abstract

Elongation of very long-chain fatty acid (Elovl) proteins is the critical rate-limiting enzyme that catalyzes the biosynthesis of long-chain polyunsaturated fatty acids (LC-PUFAs). Echinoderms are extremely important research objects in various fields, such as regeneration studies and developmental biology. However, to date, the genome-wide characterization and analysis of Elovl genes in echinoderms have not been investigated. In this study, the identification and analysis of Elovl genes in 10 representative echinoderms were performed using bioinformatics methods. A total of 117 Elovl genes have been found in the studied echinoderms. The phylogenetic tree showed that all Elovl genes from echinoderms can be subdivided into 6 classes, Elovl3-like class, Elovl4-like class, Elovl5-like class, Elovl6-like class, Elovl7-like class, and Elovl8-like class. Furthermore, the selection pressure analysis suggested that Elovl genes in echinoderms were mainly constrained by strong purifying selection events. In general, this study provides a molecular basis for echinoderm Elovl genes and may serve as a reference for in-depth phylogenomics.

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来源期刊
Russian Journal of Genetics
Russian Journal of Genetics 生物-遗传学
CiteScore
1.00
自引率
33.30%
发文量
126
审稿时长
1 months
期刊介绍: Russian Journal of Genetics is a journal intended to make significant contribution to the development of genetics. The journal publishes reviews and experimental papers in the areas of theoretical and applied genetics. It presents fundamental research on genetic processes at molecular, cell, organism, and population levels, including problems of the conservation and rational management of genetic resources and the functional genomics, evolutionary genomics and medical genetics.
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