利用 BioWordVec 提高 LSTM-CNN 混合模型在生物医学报告大数据分类中的性能

Q2 Pharmacology, Toxicology and Pharmaceutics
D. Kurniasari, W. Warsono, M. Usman, F. R. Lumbanraja, W. Wamiliana
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引用次数: 0

摘要

白血病死亡率的上升推动了有关该疾病的出版物迅速增加。出版物的增加极大地影响了生物医学文献的提升,使人工提取白血病相关资料的工作变得更加复杂。文本分类是一种用于从生物医学文献中检索相关顶级信息的方法。本研究建议采用 LSTM-CNN 混合模型来解决以白血病为中心的 PubMed 摘要数据集中的不平衡数据分类问题。随机欠采样和随机过采样技术被融合在一起,以解决数据不平衡问题。通过利用专门为生物医学领域创建的预训练词嵌入(BioWordVec),分类模型的性能得到了提高。模型评估结果表明,混合重采样技术与特定领域的预训练词嵌入可以提高模型在分类任务中的性能,准确率、精确度、召回率和 f1 分数分别达到 99.55%、99%、100% 和 99%。结果表明,这项研究可以成为帮助获取白血病信息的另一种技术。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
LSTM-CNN Hybrid Model Performance Improvement with BioWordVec for Biomedical Report Big Data Classification
The rise in mortality rates due to leukemia has fueled the swift expansion of publications concerning the disease. The increase in publications has dramatically affected the enhancement of biomedical literature, further complicating the manual extraction of pertinent material on leukemia. Text classification is an approach used to retrieve pertinent and top-notch information from the biomedical literature. This research suggests employing an LSTM-CNN hybrid model to tackle imbalanced data classification in a dataset of PubMed abstracts centred on leukemia. Random Undersampling and Random Oversampling techniques are merged to tackle the data imbalance problem. The classification model’s performance is improved by utilizing a pre trained word embedding created explicitly for the biomedical domain, BioWordVec. Model evaluation indicates that hybrid resampling techniques with domain-specific pre-trained word embeddings can enhance model performance in classification tasks, achieving accuracy, precision, recall, and f1-score of 99.55%, 99%, 100%, and 99%, respectively. The results suggest that this research could be an alternative technique to help obtain information about leukemia.
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来源期刊
Science and Technology Indonesia
Science and Technology Indonesia Pharmacology, Toxicology and Pharmaceutics-Pharmacology, Toxicology and Pharmaceutics (miscellaneous)
CiteScore
1.80
自引率
0.00%
发文量
72
审稿时长
8 weeks
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