Tingting Zhai , Jun Teng , Mengjie Gu , Yanjiao Wang , Ke Qu , Wei Yang , Shuxin Zhang
{"title":"全基因组范围内甘蓝型油菜腈指定蛋白(NSP)的鉴定和表达分析","authors":"Tingting Zhai , Jun Teng , Mengjie Gu , Yanjiao Wang , Ke Qu , Wei Yang , Shuxin Zhang","doi":"10.1016/j.cpb.2024.100342","DOIUrl":null,"url":null,"abstract":"<div><p>The complete exploitation of <em>Brassica napus</em> plants is a study hotspot, since it is an essential oil crop that is widely cultivated across the world. Glucosinolate is a unique secondary metabolite in the <em>Brassicaceae</em> family, and its content has a substantial influence on rapeseed development and quality. Its degradation products have various physiological functions, among which Nitrile specific proteins (NSPs) can hydrolyze glucosinolate and hence influence the balance of plant immunity and growth. However, the related gene families in <em>B. napus</em> have not been investigated. Here, 72 NSP family members were discovered and described in <em>B. napus</em> based on their sequence structures, physiological correlations, phonological locations, and expression levels. According to collinearity studies, the NSP proteins in <em>B. napus</em> and <em>A. thaliana</em> are closely related. Analysis of <em>BnNSP</em> expression patterns in various tissues revealed that <em>BnNSPs</em> exhibit high tissue specificity, implying that <em>BnNSPs</em> may play distinguish functions in various developmental phases. We discovered that NSPs may be regulated by hormones such as abscisic acid (ABA), gibberellin (GA), and metallic jasmonate (MeJA) based on the expression of <em>NSPs</em> during hormone treatment. The results provide valuable information for the future functional characterization of <em>BnNSP</em> genes.</p></div>","PeriodicalId":38090,"journal":{"name":"Current Plant Biology","volume":"38 ","pages":"Article 100342"},"PeriodicalIF":5.4000,"publicationDate":"2024-04-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S2214662824000240/pdfft?md5=5b8c6fc3c4afb0dd2cbbda915506acd4&pid=1-s2.0-S2214662824000240-main.pdf","citationCount":"0","resultStr":"{\"title\":\"Genome-wide identification and expression analysis of the Nitrile-specifier proteins (NSPs) in Brassica napus\",\"authors\":\"Tingting Zhai , Jun Teng , Mengjie Gu , Yanjiao Wang , Ke Qu , Wei Yang , Shuxin Zhang\",\"doi\":\"10.1016/j.cpb.2024.100342\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><p>The complete exploitation of <em>Brassica napus</em> plants is a study hotspot, since it is an essential oil crop that is widely cultivated across the world. Glucosinolate is a unique secondary metabolite in the <em>Brassicaceae</em> family, and its content has a substantial influence on rapeseed development and quality. Its degradation products have various physiological functions, among which Nitrile specific proteins (NSPs) can hydrolyze glucosinolate and hence influence the balance of plant immunity and growth. However, the related gene families in <em>B. napus</em> have not been investigated. Here, 72 NSP family members were discovered and described in <em>B. napus</em> based on their sequence structures, physiological correlations, phonological locations, and expression levels. According to collinearity studies, the NSP proteins in <em>B. napus</em> and <em>A. thaliana</em> are closely related. Analysis of <em>BnNSP</em> expression patterns in various tissues revealed that <em>BnNSPs</em> exhibit high tissue specificity, implying that <em>BnNSPs</em> may play distinguish functions in various developmental phases. We discovered that NSPs may be regulated by hormones such as abscisic acid (ABA), gibberellin (GA), and metallic jasmonate (MeJA) based on the expression of <em>NSPs</em> during hormone treatment. The results provide valuable information for the future functional characterization of <em>BnNSP</em> genes.</p></div>\",\"PeriodicalId\":38090,\"journal\":{\"name\":\"Current Plant Biology\",\"volume\":\"38 \",\"pages\":\"Article 100342\"},\"PeriodicalIF\":5.4000,\"publicationDate\":\"2024-04-03\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.sciencedirect.com/science/article/pii/S2214662824000240/pdfft?md5=5b8c6fc3c4afb0dd2cbbda915506acd4&pid=1-s2.0-S2214662824000240-main.pdf\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Current Plant Biology\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S2214662824000240\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"PLANT SCIENCES\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Current Plant Biology","FirstCategoryId":"1085","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S2214662824000240","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"PLANT SCIENCES","Score":null,"Total":0}
Genome-wide identification and expression analysis of the Nitrile-specifier proteins (NSPs) in Brassica napus
The complete exploitation of Brassica napus plants is a study hotspot, since it is an essential oil crop that is widely cultivated across the world. Glucosinolate is a unique secondary metabolite in the Brassicaceae family, and its content has a substantial influence on rapeseed development and quality. Its degradation products have various physiological functions, among which Nitrile specific proteins (NSPs) can hydrolyze glucosinolate and hence influence the balance of plant immunity and growth. However, the related gene families in B. napus have not been investigated. Here, 72 NSP family members were discovered and described in B. napus based on their sequence structures, physiological correlations, phonological locations, and expression levels. According to collinearity studies, the NSP proteins in B. napus and A. thaliana are closely related. Analysis of BnNSP expression patterns in various tissues revealed that BnNSPs exhibit high tissue specificity, implying that BnNSPs may play distinguish functions in various developmental phases. We discovered that NSPs may be regulated by hormones such as abscisic acid (ABA), gibberellin (GA), and metallic jasmonate (MeJA) based on the expression of NSPs during hormone treatment. The results provide valuable information for the future functional characterization of BnNSP genes.
期刊介绍:
Current Plant Biology aims to acknowledge and encourage interdisciplinary research in fundamental plant sciences with scope to address crop improvement, biodiversity, nutrition and human health. It publishes review articles, original research papers, method papers and short articles in plant research fields, such as systems biology, cell biology, genetics, epigenetics, mathematical modeling, signal transduction, plant-microbe interactions, synthetic biology, developmental biology, biochemistry, molecular biology, physiology, biotechnologies, bioinformatics and plant genomic resources.