利用元基因组下一代测序诊断鹦鹉热衣原体引起的肺炎和 SARS-CoV-2 合并感染:病例报告

Anbing Zhang, Jinguang Liang, Xiaoli Lao, Xiuqiong Xia, Jianping Liang
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摘要

:我们报告了一例由鹦鹉热衣原体和严重急性呼吸系统综合征冠状病毒 2(SARS-CoV-2)Omicron XBB.1 变体合并感染引起的肺炎病例,该病例通过元基因组新一代测序(mNGS)和定量聚合酶链反应(qPCR)得到了证实。利用 mNGS 在支气管肺泡灌洗液中检测到了鹦鹉热杆菌和 SARS-CoV-2 。此外,mNGS 还能检测到血液和鼻咽标本中的鹦鹉热杆菌,其灵敏度高于 qPCR。患者在接受莫西沙星治疗后康复。本报告强调了鹦鹉热杆菌和 SARS-CoV-2 协同感染的应用,因为 mNGS 已被认为是识别协同感染的诊断工具。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Pneumonia Caused by Chlamydia psittaci and SARS-CoV-2 Coinfection Diagnosed Using Metagenomic Next-Generation Sequencing: A Case Report
: We report a case of pneumonia caused by coinfection with Chlamydia psittaci and the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) Omicron XBB.1 variant, confirmed using metagenomic next-generation sequencing (mNGS) and quantitative polymerase chain reaction (qPCR). C. psittaci and SARS-CoV-2 were detected in bronchoalveolar lavage fluid using mNGS. Additionally, mNGS detected C. psittaci in blood and nasopharyngeal specimens and was more sensitive than qPCR. The patient recovered after treatment with moxifloxacin. This report highlights the use of coinfections of C. psittaci and SARS-CoV-2, as mNGS has already been recognized to be a diagnostic tool for identifying coinfections.
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