一氧化碳介导的镰状细胞脱聚合参数敏感性分析

Q2 Agricultural and Biological Sciences
Yao Messan
{"title":"一氧化碳介导的镰状细胞脱聚合参数敏感性分析","authors":"Yao Messan","doi":"10.55630/j.biomath.2023.12.036","DOIUrl":null,"url":null,"abstract":"This study investigates the impact of melting/binding rates (referred to hereafter as the parameters) over the polymers and monomers on the dynamics of carbon-monoxide-mediated sickle cell hemoglobin (HbS) de-polymerization. Two approaches, namely the traditional sensitivity analysis (TSA) and the multi-parameter sensitivity analysis (MPSA), have been developed and applied to the mathematical model system to quantify the sensitivities of polymers and monomers to the parameters. The Runge-Kutta method and the Monte-Carlo simulation are employed for the implementation of the sensitivity analyses. The TSA utilizes the traditional sensitivity functions (TSFs). The MPSA enumerates the overall effect of the model input parameters on the output by perturbing the model input parameters simultaneously within large ranges. All four concentrations (namely, de-oxy HbS monomers, CO-bound HbS monomers, de-oxy Hbs polymer and CO-bound HbS polymer) as model outputs, and all four binding/melting rates (namely, the CO binding and melting rates for polymers and monomers) as input parameters are considered in this study. The sensitivity results suggest that TSA and MPSA are essentially consistent.","PeriodicalId":52247,"journal":{"name":"Biomath","volume":null,"pages":null},"PeriodicalIF":0.0000,"publicationDate":"2024-03-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Parameter sensitivity analysis for CO-mediated sickle cell de-polymerization\",\"authors\":\"Yao Messan\",\"doi\":\"10.55630/j.biomath.2023.12.036\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"This study investigates the impact of melting/binding rates (referred to hereafter as the parameters) over the polymers and monomers on the dynamics of carbon-monoxide-mediated sickle cell hemoglobin (HbS) de-polymerization. Two approaches, namely the traditional sensitivity analysis (TSA) and the multi-parameter sensitivity analysis (MPSA), have been developed and applied to the mathematical model system to quantify the sensitivities of polymers and monomers to the parameters. The Runge-Kutta method and the Monte-Carlo simulation are employed for the implementation of the sensitivity analyses. The TSA utilizes the traditional sensitivity functions (TSFs). The MPSA enumerates the overall effect of the model input parameters on the output by perturbing the model input parameters simultaneously within large ranges. All four concentrations (namely, de-oxy HbS monomers, CO-bound HbS monomers, de-oxy Hbs polymer and CO-bound HbS polymer) as model outputs, and all four binding/melting rates (namely, the CO binding and melting rates for polymers and monomers) as input parameters are considered in this study. The sensitivity results suggest that TSA and MPSA are essentially consistent.\",\"PeriodicalId\":52247,\"journal\":{\"name\":\"Biomath\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2024-03-14\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Biomath\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.55630/j.biomath.2023.12.036\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"Agricultural and Biological Sciences\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Biomath","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.55630/j.biomath.2023.12.036","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"Agricultural and Biological Sciences","Score":null,"Total":0}
引用次数: 0

摘要

本研究探讨了聚合物和单体的熔化/结合率(以下简称参数)对一氧化碳介导的镰状细胞血红蛋白(HbS)脱聚合动力学的影响。为了量化聚合物和单体对参数的敏感性,我们开发了两种方法,即传统敏感性分析法(TSA)和多参数敏感性分析法(MPSA),并将其应用于数学模型系统。灵敏度分析采用 Runge-Kutta 方法和 Monte-Carlo 模拟。TSA 利用传统的灵敏度函数 (TSF)。MPSA 通过在较大范围内同时扰动模型输入参数,列举模型输入参数对输出的总体影响。本研究考虑了作为模型输出的所有四种浓度(即脱氧 HbS 单体、与 CO 结合的 HbS 单体、脱氧 Hbs 聚合物和与 CO 结合的 HbS 聚合物)和作为输入参数的所有四种结合率/熔化率(即聚合物和单体的 CO 结合率和熔化率)。灵敏度结果表明,TSA 和 MPSA 基本一致。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Parameter sensitivity analysis for CO-mediated sickle cell de-polymerization
This study investigates the impact of melting/binding rates (referred to hereafter as the parameters) over the polymers and monomers on the dynamics of carbon-monoxide-mediated sickle cell hemoglobin (HbS) de-polymerization. Two approaches, namely the traditional sensitivity analysis (TSA) and the multi-parameter sensitivity analysis (MPSA), have been developed and applied to the mathematical model system to quantify the sensitivities of polymers and monomers to the parameters. The Runge-Kutta method and the Monte-Carlo simulation are employed for the implementation of the sensitivity analyses. The TSA utilizes the traditional sensitivity functions (TSFs). The MPSA enumerates the overall effect of the model input parameters on the output by perturbing the model input parameters simultaneously within large ranges. All four concentrations (namely, de-oxy HbS monomers, CO-bound HbS monomers, de-oxy Hbs polymer and CO-bound HbS polymer) as model outputs, and all four binding/melting rates (namely, the CO binding and melting rates for polymers and monomers) as input parameters are considered in this study. The sensitivity results suggest that TSA and MPSA are essentially consistent.
求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Biomath
Biomath Agricultural and Biological Sciences-Agricultural and Biological Sciences (miscellaneous)
CiteScore
2.20
自引率
0.00%
发文量
6
审稿时长
20 weeks
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信