还原合成:基因组规模合成生物学的主流方法。

IF 14.3 1区 工程技术 Q1 BIOTECHNOLOGY & APPLIED MICROBIOLOGY
Trends in biotechnology Pub Date : 2024-08-01 Epub Date: 2024-02-28 DOI:10.1016/j.tibtech.2024.02.008
Kangsan Kim, Donghui Choe, Suhyung Cho, Bernhard Palsson, Byung-Kwan Cho
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引用次数: 0

摘要

系统生物学和合成生物学的进步推动了缩小细菌基因组的构建。基因组还原最初的重点是探索最小基因组的特性,但最近它已被用作一种工程策略来提高菌株的性能。这篇综述提供了还原基因组的最新进展,重点介绍了构建还原基因组的自上而下还原和自下而上合成的双轨方法。利用基于成熟工业主力菌株的研究案例,我们讨论了一系列可用于生物技术应用的合成表型的构建。最后,我们探讨了还原基因组在生物技术应用中的可能用途,以及最终可能导致合理设计基因组的全面合成的未来研究方向。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Reduction-to-synthesis: the dominant approach to genome-scale synthetic biology.

Advances in systems and synthetic biology have propelled the construction of reduced bacterial genomes. Genome reduction was initially focused on exploring properties of minimal genomes, but more recently it has been deployed as an engineering strategy to enhance strain performance. This review provides the latest updates on reduced genomes, focusing on dual-track approaches of top-down reduction and bottom-up synthesis for their construction. Using cases from studies that are based on established industrial workhorse strains, we discuss the construction of a series of synthetic phenotypes that are candidates for biotechnological applications. Finally, we address the possible uses of reduced genomes for biotechnological applications and the needed future research directions that may ultimately lead to the total synthesis of rationally designed genomes.

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来源期刊
Trends in biotechnology
Trends in biotechnology 工程技术-生物工程与应用微生物
CiteScore
28.60
自引率
1.20%
发文量
198
审稿时长
1 months
期刊介绍: Trends in Biotechnology publishes reviews and perspectives on the applied biological sciences, focusing on useful science applied to, derived from, or inspired by living systems. The major themes that TIBTECH is interested in include: Bioprocessing (biochemical engineering, applied enzymology, industrial biotechnology, biofuels, metabolic engineering) Omics (genome editing, single-cell technologies, bioinformatics, synthetic biology) Materials and devices (bionanotechnology, biomaterials, diagnostics/imaging/detection, soft robotics, biosensors/bioelectronics) Therapeutics (biofabrication, stem cells, tissue engineering and regenerative medicine, antibodies and other protein drugs, drug delivery) Agroenvironment (environmental engineering, bioremediation, genetically modified crops, sustainable development).
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