从基因组学角度揭示巴西潘氏蓝藻 CCIBt3594 的分类和代谢过程

Taxonomy Pub Date : 2024-02-05 DOI:10.3390/taxonomy4010010
Mauricio Junior Machado, Natalia Betancurt Botero, A. P. Andreote, Anderson Miguel Teixeira Feitosa, R. V. Popin, K. Sivonen, M. Fiore
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引用次数: 0

摘要

淡水丹顶鹤属由蓝藻单细胞物种组成,具有特殊的形态,形成自由漂浮的圆形菌落,菌落粘液稀薄、均质、无色。目前关于盘藻分类学的文献很少,关于其新陈代谢的文献也没有。本研究首次对从巴西潘塔纳尔生物群落中分离出的盘尼西林菌株进行了基因组鉴定。基因组被组装成 117 个等位组,总大小为 5.1 Mb,完整性为 99.12%。其中包含 4988 个编码蛋白质的基因,包括一些参与次生代谢物生物合成的基因,如蓝藻素和萜烯。有趣的是,P. brasiliensis CCIBt3594 具有一套完整的固氮基因,是一种非异胞单细胞蓝藻。最后,系统发生组分析表明,缺乏关于近缘菌株的信息,并将 Pannus 属归属于微囊藻科 Chroococcales 目,与微囊藻属代表最接近。这项研究提供了有关蓝藻门中一个特征稀少的属的新证据,有助于阐明单细胞蓝藻类群的分类和系统问题。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Genomic Insights into the Taxonomy and Metabolism of the Cyanobacterium Pannus brasiliensis CCIBt3594
The freshwater Pannus genus comprises cyanobacterial unicellular species with a particular morphology, forming free-floating rounded colonies with thin, homogenous, and colorless colonial mucilage. There is little literature on the taxonomy of the Pannus and none on its metabolism. This study presents the first genomic characterization of a Pannus strain isolated from Pantanal Biome, Brazil. The genome was assembled into 117 contigs with a total size of 5.1 Mb and 99.12% completeness. It contained 4988 protein-encoding genes, including some involved in secondary metabolite biosynthesis, such as cyanobactin and terpenes. Interestingly, P. brasiliensis CCIBt3594 has a complete set of nitrogen fixation genes and is a non-heterocytou unicellular cyanobacterium. Finally, the phylogenomic analyses revealed the lack of information on closely related strains and anchored the genus Pannus within the order Chroococcales, Microcystaceae family, closest to Microcystis spp. representatives. This work presents novel evidence concerning a sparsely characterized genus of the Cyanobacteria phylum and contributes to elucidating taxonomic and systematic issues within the group of unicellular cyanobacteria.
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CiteScore
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