单细胞 RNA 测序揭示人类肺部的端粒亚群

Lihua Dai, Songshan Cai, Lingyan Wang, Yifei Liu, Fangming Liu, Xiangdong Wang, Dongli Song
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引用次数: 0

摘要

背景 Telocyte(TC)是一种新近定义的更新细胞,它与其他细胞之间的主导性交流在组织稳态和疾病中显示出多种功能。肺泡上皮细胞和免疫细胞参与了肺癌的异质性、进展和转移,并进一步与抗肿瘤治疗策略相关联。然而,很少有研究关注肺泡上皮细胞在肺癌中的作用。 方法 本文利用公开的 scRNA-Seq 数据(包括健康对照、慢性阻塞性肺疾病、非小细胞肺癌、非小细胞肺癌淋巴结转移以及系统性硬化相关间质性肺疾病患者)分析了人肺中的细胞动态和不同类型的 TCs 及其与多种细胞类型的通讯网络。 结果 通过特定生物功能标记物的表达鉴定出六个 TCs 亚群,这表明肺组织中 TCs 亚群的多样性。进一步的结果显示,TCs与上皮细胞或免疫细胞亚群之间存在配体-受体相互作用,包括TIMP金属肽酶抑制剂1CD63、纤维蛋白1整合素亚基β1、波形蛋白CD44、巨噬细胞迁移抑制因子CD74和淀粉样β前体蛋白CD74。健康或患病肺组织中的配体-受体相互作用具有异质性。研究发现了配体与受体相互作用中增强的特异性信号,其中包括整合素β1和CD44在TC与上皮细胞、NK细胞、NKT细胞、CD4+衰竭T细胞、CD4+记忆/效应T细胞、CD4+幼稚T细胞、CD8+衰竭T细胞、CD8+记忆/效应T细胞和CD8+幼稚T细胞的通讯中的评估。CD63是在TCs外泌体中发现的一个标记,在我们目前的分析中得到了强调,它与TCs与其他细胞类型的交流密切相关。 结论 这些研究结果将为我们提供关于TCs主导的通讯机制的新见解,并为TC外泌体在肺部疾病中的治疗提供了希望。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Single-cell RNA sequencing reveals telocytes subsets of human lung

Single-cell RNA sequencing reveals telocytes subsets of human lung

Background

Telocyte (TC) is a recently defined renewed cell and its dominant intercommunication with other cells displays multiple functions in tissue homeostasis and diseases. Alveolar epithelial cells and immune cells were in the lung cancer heterogeneity, progression, and metastasis, and further associated with antitumor therapeutic strategies. However, few studies focus on the roles of TCs in lung cancer.

Methods

In this article, we used the public scRNA-Seq data (including healthy control, chronic obstructive pulmonary disease, non–small cell lung cancer, lymph node metastases from non–small cell lung cancer, and systemic sclerosis–associated interstitial lung disease patients) to analyze the cellular dynamics in human lung and distinct types of TCs and their communication networks with the variety of cell types.

Results

Six subclusters of TCs were identified by expression of specific biological function markers, which demonstrated the diversity of TCs subsets in lung tissue. Further results showed TCs had communication with epithelial cells or immune cells subsets by the ligand–receptor interaction, including TIMP metallopeptidase inhibitor 1CD63, fibulin 1integrin subunit beta 1, vimentinCD44, macrophage migration inhibitory factorCD74, and amyloid beta precursor proteinCD74. Ligand–receptor interaction heterogeneity was revealed in lung tissue of healthy or diseases. Enhanced specific signals in ligandreceptor interaction were revealed, including integrin beta 1 and CD44 were appraised in the communication of TCs with epithelial cells, NK cells, NKT cells, CD4+ exhausted T cells, CD4+ memory/effector T cells, CD4+ naïve T cells, CD8+ exhausted T cells, CD8+ memory/effector T cells, and CD8+ naïve T cells. CD63, a marker identified in TCs exosomes was emphasized in our current analysis which is closely related to communication of TCs with other cell types.

Conclusion

These results will provide us with new insight into the mechanisms of TCs-dominated communication and promise therapy of TC exosomes in lung diseases.

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