Jared Vicory, Ye Han, Juan Carlos Prieto, David Allemang, Mathieu Leclercq, Connor Bowley, Harald Scheirich, Jean-Christophe Fillion-Robin, Steve Pizer, James Fishbaugh, Guido Gerig, Martin Styner, Beatriz Paniagua
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引用次数: 0
摘要
三维（3D）形状是了解我们周围实物的核心。在生物医学领域，形状分析在量化解剖结构如何随时间和疾病发生变化方面具有强大的作用。形状分析工具箱（SALT）作为一种开源、免费的综合软件工具，是传播先进形状分析方法的载体。我们将介绍形状分析软件包的新进展，包括易于理解的统计方法，以便更好地利用 SALT 的形状表示法中包含的定量信息。我们还展示了 SlicerPipelines 模块，该模块通过促进大规模数据集的分析、为非专业用户实现工作流程自动化以及允许发布可复制的工作流程来提高 SALT 的可用性。
SlicerSALT: From Medical Images to Quantitative Insights of Anatomy.
Three-dimensional (3D) shape lies at the core of understanding the physical objects that surround us. In the biomedical field, shape analysis has been shown to be powerful in quantifying how anatomy changes with time and disease. The Shape AnaLysis Toolbox (SALT) was created as a vehicle for disseminating advanced shape methodology as an open source, free, and comprehensive software tool. We present new developments in our shape analysis software package, including easy-to-interpret statistical methods to better leverage the quantitative information contained in SALT's shape representations. We also show SlicerPipelines, a module to improve the usability of SALT by facilitating the analysis of large-scale data sets, automating workflows for non-expert users, and allowing the distribution of reproducible workflows.
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