大水蚤(Daphnia magna Straus, Cladocera,甲壳纲)视频图像处理作为自动化生物检测方法的基础

Q4 Environmental Science
A. S. Olkova, E. V. Medvedeva
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引用次数: 0

摘要

计算机处理带有测试生物的视频序列是生物测试发展的一个有前途的方向,因为单位时间内方法的吞吐量大大增加,并且同时考虑了几个测试反应。这项工作的目的是开发和测试一种自动化方法,用于考虑D. magna测试功能的复合体,以进一步评估水生环境的毒性。使用Python编程语言和OpenCV计算机视觉库处理带有D. magna的视频。所开发的算法可以检测不同年龄的D. magna个体,确定其线性尺寸,速度和加速度。该功能应用于大鼠模型组,可以评估样品的急性毒性(通过致死和亚致死效应)和慢性毒性(通过出生的幼崽数量及其生理反应)。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Video image processing of Daphnia magna Straus (Cladocera, Crustacea) as a basis for automated biotesting methods
Computer processing of a video sequence with test organisms is a promising direction in the development of biotesting, as the throughput of methods per unit time increases significantly and several test reactions are taken into account simultaneously. The aim of the work is to develop and test an automated method for considering a complex of D. magna test functions for further assessment of the toxicity of aquatic environments. Videos with D. magna were processed using the Python programming language and the OpenCV computer vision library. The developed algorithm makes it possible to detect D. magna individuals of different ages, to determine their linear dimensions, velocities and accelerations. This functionality, applied to model groups of D. magna, makes it possible to assess the acute toxicity (by lethal and sublethal effects) and chronic toxicity of samples (by the number of juveniles born and their physiological reactions).
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来源期刊
Povolzhskii ekologicheskii zhurnal
Povolzhskii ekologicheskii zhurnal Agricultural and Biological Sciences-Ecology, Evolution, Behavior and Systematics
CiteScore
0.80
自引率
0.00%
发文量
15
审稿时长
9 weeks
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