与DASH饮食评分的全基因组相互作用分析发现了新的收缩压基因座

Melanie Guirette, Jessie Lan, Nicola M Mckeown, Michael R. Brown, Han Chen, Paul S De Vries, Hyunju Kim, Casey M. Rebholz, Alanna C. Morrison, Traci Mae Bartz, Amanda Fretts, Xiuqing Guo, Rozenn N Lemaitre, Ching-Ti Liu, Raymond Noordam, Renée de Mutsert, Frits R. Rosendaal, Carol A Wang, Lawrence J. Beilin, Trevor A. Mori, Wendy H Oddy, Craig E Pennell, Jin-Fang Chai, Clare Whitton, Rob M. van Dam, Jianjun Liu, E Shyong Tai, Xueling Sim, Marian L. Neuhouser, Charles Kooperberg, Lesley F. Tinker, Nora Franceschini, TianXiao Huan, Thomas W Winkler, Amy R. Bentley, W. James Gauderman, Luc Heerkens, Toshiko Tanaka, Jeroen Van Rooij, Patricia B. Munroe, Helen R. Warren, Trudy Voortman, Honglei Chen, D.C. Rao, Daniel Levy, Jiantao Ma
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Rao, Daniel Levy, Jiantao Ma","doi":"10.1101/2023.11.10.23298402","DOIUrl":null,"url":null,"abstract":"Objective: We examined interactions between genotype and a Dietary Approaches to Stop Hypertension (DASH) diet score in relation to systolic blood pressure (SBP). Methods: We analyzed up to 9,420,585 biallelic imputed single nucleotide polymorphisms (SNPs) in up to 127,282 individuals of six population groups (91% of European population) from the Cohorts for Heart and Aging Research in Genomic Epidemiology consortium (CHARGE; n=35,660) and UK Biobank (n=91,622) and performed European population-specific and cross-population meta-analyses. Results: We identified three loci in European-specific analyses and an additional four loci in cross-population analyses at P for interaction < 5e-8. 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引用次数: 0

摘要

目的:我们研究了基因型和饮食方法来停止高血压(DASH)饮食评分与收缩压(SBP)之间的相互作用。方法:我们分析了来自基因组流行病学联盟(CHARGE;n=35,660)和UK Biobank (n=91,622),并进行了欧洲人群特异性和跨人群荟萃分析。结果:我们在欧洲特异性分析中发现了3个位点,在相互作用<的交叉群体分析中发现了另外4个位点;5 e-8。我们观察到15q25.1位点rs117878928(次要等位基因频率= 0.03)与DASH饮食评分之间存在一致的交互作用(交互作用P = 4e-8;在欧洲人群中,异质性P = 0.35),在CHARGE和UK Biobank中,相互作用效应大小分别为0.42±0.09 mm Hg(相互作用P = 9.4e-7)和0.20±0.06 mm Hg(相互作用P = 0.001)。rs117878928周围1mb区域富集了顺式表达数量性状位点(eQTL)变异(P = 4e-273)和顺式dna甲基化数量性状位点(mQTL)变异(P = 1e-300)。虽然与rs117878928最接近的基因是MTHFS,但该位点上可能与DASH饮食评分相互作用的snp所占的最高狭义遗传力是15q25.1的ST20基因。结论:我们证明了基因- dash饮食评分在几个位点上对收缩压的相互作用。需要更多不同人群的研究来验证我们的发现。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Genome-Wide Interaction Analysis with DASH Diet Score Identified Novel Loci for Systolic Blood Pressure
Objective: We examined interactions between genotype and a Dietary Approaches to Stop Hypertension (DASH) diet score in relation to systolic blood pressure (SBP). Methods: We analyzed up to 9,420,585 biallelic imputed single nucleotide polymorphisms (SNPs) in up to 127,282 individuals of six population groups (91% of European population) from the Cohorts for Heart and Aging Research in Genomic Epidemiology consortium (CHARGE; n=35,660) and UK Biobank (n=91,622) and performed European population-specific and cross-population meta-analyses. Results: We identified three loci in European-specific analyses and an additional four loci in cross-population analyses at P for interaction < 5e-8. We observed a consistent interaction between rs117878928 at 15q25.1 (minor allele frequency = 0.03) and the DASH diet score (P for interaction = 4e-8; P for heterogeneity = 0.35) in European population, where the interaction effect size was 0.42±0.09 mm Hg (P for interaction = 9.4e-7) and 0.20±0.06 mm Hg (P for interaction = 0.001) in CHARGE and the UK Biobank, respectively. The 1 Mb region surrounding rs117878928 was enriched with cis-expression quantitative trait loci (eQTL) variants (P = 4e-273) and cis-DNA methylation quantitative trait loci (mQTL) variants (P = 1e-300). While the closest gene for rs117878928 is MTHFS, the highest narrow sense heritability accounted by SNPs potentially interacting with the DASH diet score in this locus was for gene ST20 at 15q25.1. Conclusion: We demonstrated gene-DASH diet score interaction effects on SBP in several loci. Studies with larger diverse populations are needed to validate our findings.
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