水痘带状疱疹病毒b细胞表位肽疫苗的芯片设计

Anik Syaidatul Nur Khasana, Nur Lailieany Stellany Hartono, Vanessya Oscar Permatasari, Dian Laili Ramadhan, F. A. N. Sumadi
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引用次数: 0

摘要

世界上90%以上的人口在儿童时期接触水痘时感染水痘带状疱疹病毒(VZV)或更广为人知的带状疱疹(蛇痘/带状疱疹)。大多数感染水痘的儿童会康复。然而,这种病毒可以在体内“沉睡”数十年,三分之一的感染者会突然以带状疱疹或带状疱疹的形式再次活跃起来。带状疱疹或蛇痘是一种以身体一侧出现皮疹和充满水的结节并伴有疼痛为特征的疾病。带状疱疹可引起疼痛的皮疹以及各种并发症,如缺血性中风,当大脑的血液供应因动脉狭窄或血栓阻塞而受到限制时,就会发生缺血性中风。因此,需要疫苗作为一种预防措施。基于表位的肽疫苗在选择性和安全性方面都具有优势。使用计算方法是开发疫苗的一种具有成本效益的方法。在这项研究中,目的是利用计算机方法观察ZVZ糖蛋白E蛋白序列的保守区域,以观察该蛋白序列中最具免疫原性的表位的潜力。水痘带状疱疹病毒作为候选疫苗通过计算机应用。使用的一些软件和网站有MEGA-X, IEDB, VaxiJen 2.0, BLASTp NCBI。在收集到的7个序列中,有3个候选表位具有抗原性,并通过了相似性试验,具有开发肽疫苗的潜力,包括:KGDLNPKPQGQ、PPATTKPKE、PAIQHICLKHTTCFQDVVVDVDCA
本文章由计算机程序翻译,如有差异,请以英文原文为准。
IN SILICO DESIGN OF B-CELL EPITOPE BASED PEPTIDE VACCINE FOR VARICELLA ZOSTER VIRUS
More than 90% of the world's population has the varicella zoster virus (VZV) or better known as herpes zoster (snakepox/shingles) when they are exposed to chickenpox as children. The majority of children infected with chickenpox will recover. However, this virus can "sleep" for decades in the body and one-third of people with this virus can suddenly become active again in the form of herpes zoster or shingles. Herpes zoster or snake pox is a disease characterized by the appearance of a rash and water-filled nodules accompanied by pain on one side of the body. Herpes zoster can cause a painful rash as well as a wide spectrum of complications such as ischemic stroke which occurs when the blood supply to the brain is restricted by narrowed arteries or blocked by clots. Therefore, vaccines are needed as a preventive measure. Epitope-based peptide vaccines have advantages in terms of both selectivity and safety. The use of computational methods is a cost-effective way to develop vaccines. In this study the aim was to look at the ZVZ glycoprotein E protein sequence conservation areas using the in-silico method, to see the potential for the most immunogenic epitope of the protein sequence. Varicella zoster virus as a vaccine candidate through in-silico use. Some of the software and websites used are MEGA-X, IEDB, VaxiJen 2.0, BLASTp NCBI. Of the 7 sequences that have been collected, 3 candidate epitopes have antigenic properties and have also passed the similarity test so that they have the potential to develop peptide vaccines including: KGDLNPKPQGQ, PPATTKPKE, PAIQHICLKHTTCFQDVVVDVDCA
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