J. Kusnadi, Kevin Hohn Hernandi, Khotibul Umam Al-Awwaly, E. L. Arumingtyas, H. Hakiki, N. Istianah
{"title":"用多重PCR技术检测牛DNA片段的特异性引物设计及性能试验","authors":"J. Kusnadi, Kevin Hohn Hernandi, Khotibul Umam Al-Awwaly, E. L. Arumingtyas, H. Hakiki, N. Istianah","doi":"10.15575/ijhar.v4i2.15573","DOIUrl":null,"url":null,"abstract":"Adulterating meat products with several species, including non-halal species, is often found in commercial products. Therefore, non-halal ingredients are a major source of concern for Muslims. Multiplex polymerase chain reaction (PCR) with multiple primers can detect contamination of meat components from non-halal species in a single reaction process, making it more effective and efficient. Multiplex PCR is a PCR technique that uses multiple primers and DNA samples in one reaction to amplify multiple target regions. In this study, a pair of species-specific primers encoding the Cytochrome c oxidase subunit I (CO1) gene were designed to amplify bovine DNA, tested for specificity, and applied in multiplex PCR technique together with D-loop primers for pigs, Cyt-b for rats, and 12S rRNA for dogs. The CO1 primers, along with D-loop primers for porcine, Cyt-b primers for rats, and 12S rRNA primers for dogs, can be used to detect specific bovine DNA with a size of 279 bp and sequence similarity of 96%.","PeriodicalId":410025,"journal":{"name":"Indonesian Journal of Halal Research","volume":null,"pages":null},"PeriodicalIF":0.0000,"publicationDate":"2022-08-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Design and Performance Test of Specific Primers to Detect Bovine DNA Fragments using Multiplex PCR Technique for Halal Authentification\",\"authors\":\"J. Kusnadi, Kevin Hohn Hernandi, Khotibul Umam Al-Awwaly, E. L. Arumingtyas, H. Hakiki, N. Istianah\",\"doi\":\"10.15575/ijhar.v4i2.15573\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Adulterating meat products with several species, including non-halal species, is often found in commercial products. Therefore, non-halal ingredients are a major source of concern for Muslims. Multiplex polymerase chain reaction (PCR) with multiple primers can detect contamination of meat components from non-halal species in a single reaction process, making it more effective and efficient. Multiplex PCR is a PCR technique that uses multiple primers and DNA samples in one reaction to amplify multiple target regions. In this study, a pair of species-specific primers encoding the Cytochrome c oxidase subunit I (CO1) gene were designed to amplify bovine DNA, tested for specificity, and applied in multiplex PCR technique together with D-loop primers for pigs, Cyt-b for rats, and 12S rRNA for dogs. The CO1 primers, along with D-loop primers for porcine, Cyt-b primers for rats, and 12S rRNA primers for dogs, can be used to detect specific bovine DNA with a size of 279 bp and sequence similarity of 96%.\",\"PeriodicalId\":410025,\"journal\":{\"name\":\"Indonesian Journal of Halal Research\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2022-08-31\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Indonesian Journal of Halal Research\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.15575/ijhar.v4i2.15573\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Indonesian Journal of Halal Research","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.15575/ijhar.v4i2.15573","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
Design and Performance Test of Specific Primers to Detect Bovine DNA Fragments using Multiplex PCR Technique for Halal Authentification
Adulterating meat products with several species, including non-halal species, is often found in commercial products. Therefore, non-halal ingredients are a major source of concern for Muslims. Multiplex polymerase chain reaction (PCR) with multiple primers can detect contamination of meat components from non-halal species in a single reaction process, making it more effective and efficient. Multiplex PCR is a PCR technique that uses multiple primers and DNA samples in one reaction to amplify multiple target regions. In this study, a pair of species-specific primers encoding the Cytochrome c oxidase subunit I (CO1) gene were designed to amplify bovine DNA, tested for specificity, and applied in multiplex PCR technique together with D-loop primers for pigs, Cyt-b for rats, and 12S rRNA for dogs. The CO1 primers, along with D-loop primers for porcine, Cyt-b primers for rats, and 12S rRNA primers for dogs, can be used to detect specific bovine DNA with a size of 279 bp and sequence similarity of 96%.