从拓扑学的角度解释为什么假枢纽不是必要的

Yun-yuan Dong, Yang Jun, Qi-jun Liu, Zhenghua Wang
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引用次数: 0

摘要

中心性-致死性法则表明,在蛋白-蛋白相互作用(PPI)网络中具有较高程度的蛋白比那些偶然选择的蛋白更有可能成为必需蛋白。然而,在PPI网络中,仍有许多高度非必需的蛋白质(假枢纽)。从拓扑的角度比较假枢纽与本质枢纽的差异,如中心性测度、损伤、聚类系数和相邻节点之间的相互作用,假枢纽具有可区分的显著特性。假中心具有较低的子图中心性和较少的邻居之间的相互作用,这可以解释为什么它们在某种程度上不是必不可少的。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
From the Topological View to Explain Why False Hub is Not Essential
Centrality-lethality rule demonstrates that proteins with high degree in the protein-protein interaction (PPI) network are more likely to be essential than those selected by chance. Nevertheless, in PPI network, there are still many proteins with high degree are not essential (false hubs). Comparing the difference between false hubs and essential hubs from topological perspective, such as centrality measures, damage, clustering coefficient and interactions between neighbors, there are distinguishable significant properties of false hubs. False hubs have lower sub graph centrality and less interactions between neighbors, which could explain why they are not essential in some extent.
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