Covariance Analysis of Chlorophyll Distribution in the Sundays River Estuary, Eastern Cape

Summary An analysis of covariance performed on chlorophyll a distribution data from the Sundays River estuary identified five persistent water masses with significantly different chlorophyll a contents. These corresponded to different hydrodynamic regions within the estuary. The relationship between salinity and chlorophyll a was used to identify a transition zone between the low-salinity upper estuary and the brackish riverine inflow. Chlorophyll a concentrations ranged from 100 μg 1−1 in the middle and upper reaches. High variance of chlorophyll a data in this region was the result of temporal chlorophyll a fluctuations in two time scales. The first related to the daily ebb/tide and the second to the lunar spring/neap tidal cycle. Unlike its importance in larger and deeper estuaries, light played only a minor role in the horizontal distribution of chlorophyll a. The presence of a chlorophyll a maximum in the turbid low salinity region is explained in terms of the relatively ...