从全基因组水平研究甜菜膨胀素基因家族及其在非生物胁迫下的表达反应。

IF 1.8 4区 生物学 Q3 BIOLOGY
Biologia futura Pub Date : 2023-09-01 Epub Date: 2023-08-29 DOI:10.1007/s42977-023-00176-1
Dima Faris Abdulkhadum Al-Mamoorı, Yasemin Celik Altunoglu, Erdoğan Horuz, Büşra Özkan Kök
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引用次数: 0

摘要

甜菜主要用于世界各地的食糖生产。膨胀蛋白是一个有效调节细胞壁结构的细胞壁蛋白基因家族。它们还参与发育阶段,包括细胞和叶片生长、根系发育和果实成熟。本研究全面表征了在甜菜基因组中发现的膨胀蛋白基因家族成员。此外,本研究还通过qRT-PCR方法对不同非生物胁迫条件下甜菜膨胀素基因的计算机表达分析和干旱和高温联合胁迫下膨胀素基因表达谱进行了评估。共鉴定出31个甜菜膨胀素基因。BvuEXLA-02和BvuEXLB-02基因除了在正常发育中发挥作用外,还可以发挥非生物胁迫耐受作用。家庭成员测定甜菜膨胀素的性质可以帮助实现纤维素水解机制并提高植物生物量。阐明甜菜膨胀素基因在可变胁迫条件下的表达谱可以支持提高植物生产力。目前的研究结果也可能有助于未来深入了解甜菜膨胀素基因。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Investigation of the expansin gene family in sugar beet (Beta vulgaris) by the genome-wide level and their expression responses under abiotic stresses.

Investigation of the expansin gene family in sugar beet (Beta vulgaris) by the genome-wide level and their expression responses under abiotic stresses.

Sugar beet (Beta vulgaris ssp. vulgaris) is primarily used in sugar production worldwide. Expansins are a gene family of cell wall proteins effective in regulating cell wall structure. They also participate in developmental stages, including cell and leaf growth, root development, and fruit ripening. This study comprehensively characterizes the expansin gene family members found in the sugar beet genome. In addition, in silico expression analysis of sugar beet expansin genes under variable abiotic stress conditions and expression profiles of expansin genes under combined drought and heat stresses by the qRT-PCR method were evaluated in the study. A total of 31 sugar beet expansin genes were identified. BvuEXLA-02 and BvuEXLB-02 genes can have abiotic stress tolerance roles besides their roles in normal development. Determining the properties of sugar beet expansin, family members can help enable the cellulose hydrolysis mechanism and raise plant biomass. Elucidating expression profiles of the sugar beet expansin genes under variable stress conditions can support improving plant productivity. The results of the current study may also contribute to the deep understanding of sugar beet expansin genes in the future.

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来源期刊
Biologia futura
Biologia futura Agricultural and Biological Sciences-Agricultural and Biological Sciences (all)
CiteScore
3.50
自引率
0.00%
发文量
27
期刊介绍: How can the scientific knowledge we possess now influence that future? That is, the FUTURE of Earth and life − of humankind. Can we make choices in the present to change our future? How can 21st century biological research ask proper scientific questions and find solid answers? Addressing these questions is the main goal of Biologia Futura (formerly Acta Biologica Hungarica). In keeping with the name, the new mission is to focus on areas of biology where major advances are to be expected, areas of biology with strong inter-disciplinary connection and to provide new avenues for future research in biology. Biologia Futura aims to publish articles from all fields of biology.
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