TLR-8、TNF-α和ESR-1α基因多态性在关节炎发病中的易感性。

IF 1.4 4区 生物学 Q4 GENETICS & HEREDITY
Maryam Mukhtar, Nadeem Sheikh, Andleeb Batool, Tayyaba Saleem, Muhammad Babar Khawar, Mavra Irfan, Saira Kainat Suqaina
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引用次数: 0

摘要

关节炎是一种以骨骼和关节退化为特征的遗传性疾病,伴有剧烈的疼痛和炎症。研究表明,0个候选基因变异在其发生发展过程中起着至关重要的作用。因此,我们研究了巴基斯坦人群中TLR-8、TNF和ESR-1α基因的遗传变异。进行了一项病例对照研究,包括300名RA, 316名OA和412名对照。PCR-RFLP和直接测序法测定遗传变异。采用PLINK和mega6.0软件进行分析。rs3764879 (TLR-8)、rs3764880 (TLR-8)、rss5744080 (TLR-8)、rs1800629 (TNF)、rs2228480 (ESR-1α)和rs1451501590 (ESR-1α)基因多态性的等位基因和遗传频率在RA、OA和对照组之间存在显著差异。TLR-8上的新功能突变SCV000844945和SCV000844946,以及ESR-1α上的无功能突变SCV000804801和功能突变SCV000804802也首次在研究人群中被发现和报道。多位点分析表明,TLR-8和ESR-1α基因多态性是下一代发病的重要危险因素。综上所述,TLR-08和ESR-1α在关节炎的发病中具有重要意义,而TNF在RA和OA的发病中未被发现是一个重要的危险因素。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

<i>TLR-8</i>, <i>TNF-α</i>, and <i>ESR-1α</i> Gene Polymorphism Susceptibility in Onset of Arthritis.

<i>TLR-8</i>, <i>TNF-α</i>, and <i>ESR-1α</i> Gene Polymorphism Susceptibility in Onset of Arthritis.

<i>TLR-8</i>, <i>TNF-α</i>, and <i>ESR-1α</i> Gene Polymorphism Susceptibility in Onset of Arthritis.

TLR-8, TNF-α, and ESR-1α Gene Polymorphism Susceptibility in Onset of Arthritis.

Arthritis is a genetic disorder characterized by bones and joint degradation assisted by severe pain and inflammation. It is evident by the studies that 0 candidate genes variations play vital role in its development and progression. Therefore, we investigated the genetic variation of TLR-8, TNF, and ESR-1α genes in the Pakistani population. A case-control study comprising 300 RA, 316 OA, and 412 control subjects was conducted. PCR-RFLP and direct sequencing methods were used for determining genetic variations. Analysis was performed by using PLINK and MEGA 6.0 software. Allelic and genetic frequencies of polymorphisms identified on rs3764879 (TLR-8), rs3764880 (TLR-8), rs5744080 (TLR-8), rs1800629 (TNF), rs2228480 (ESR-1α), and rs1451501590 (ESR-1α) were significantly varied among RA, OA, and controls. Novel functional mutations SCV000844945 and SCV000844946 on TLR-8 as well as a non-functional SCV000804801 and functional variation SCV000804802 on ESR-1α were also identified and reported for the first time in the studied population. Multiple site analyses indicated that polymorphisms on TLR-8 and ESR-1α genes were significant risk factors in disease onset to the next generation. In conclusion, TLR-08 and ESR-1α were significant in the onset of arthritis whereas the TNF was not found as a significant risk factor in the onset of RA and OA.

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来源期刊
Genetics research
Genetics research 生物-遗传学
自引率
6.70%
发文量
74
审稿时长
>12 weeks
期刊介绍: Genetics Research is a key forum for original research on all aspects of human and animal genetics, reporting key findings on genomes, genes, mutations and molecular interactions, extending out to developmental, evolutionary, and population genetics as well as ethical, legal and social aspects. Our aim is to lead to a better understanding of genetic processes in health and disease. The journal focuses on the use of new technologies, such as next generation sequencing together with bioinformatics analysis, to produce increasingly detailed views of how genes function in tissues and how these genes perform, individually or collectively, in normal development and disease aetiology. The journal publishes original work, review articles, short papers, computational studies, and novel methods and techniques in research covering humans and well-established genetic organisms. Key subject areas include medical genetics, genomics, human evolutionary and population genetics, bioinformatics, genetics of complex traits, molecular and developmental genetics, Evo-Devo, quantitative and statistical genetics, behavioural genetics and environmental genetics. The breadth and quality of research make the journal an invaluable resource for medical geneticists, molecular biologists, bioinformaticians and researchers involved in genetic basis of diseases, evolutionary and developmental studies.
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