新型传染性支气管炎病毒基因型(GVIII)

IF 1.3 4区 农林科学 Q2 VETERINARY SCIENCES
D Petzoldt, N Vogel, W Bielenberg, J Haneke, H Bischoff, M Liman, S Rönchen, K-P Behr, T Menke
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引用次数: 3

摘要

自2015年年中以来,越来越多的鸡样本在筛选PCR中呈传染性支气管炎病毒(IBV)阳性,但在任何已建立的变异特异性PCR测试中均未显示阳性结果(793B, QX, D1466,马萨诸塞州,D274,意大利02,阿肯色州,变体2,Q1)。这些样本的病毒基因组部分测序显示出极大的相似性,但与任何其他已知的GI-GVII IBV基因型和谱系相比,S1基因的核苷酸相似性仅为57%-61%。由于S1基因的核苷酸同源性约为80%,国家生物技术信息中心数据库(截至2020年3月15日)中最接近的菌株是北美PA/1220/98分离物(AY789942),该菌株被Valastro等人于2016年指定为唯一变体。由于其与其他IBV菌株的差异,我们认为该菌株命名为IB80,是一种新型IBV基因型GVIII的型株。到目前为止,IB80已在商品蛋鸡和肉鸡亲本鸡群中检测到,经常出现产蛋量严重下降以及欧洲和其他地区的肉鸡群。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
IB80-A Novel Infectious Bronchitis Virus Genotype (GVIII).

Since mid-2015, there has been an increasing number of chicken samples that are positive for infectious bronchitis virus (IBV) in a screening PCR but which do not show positive results in any established, variant-specific PCR tests (793B, QX, D1466, Massachusetts, D274, Italy 02, Arkansas, Variant 2, Q1). Partial sequencing of the viral genome of those samples shows great similarities, but nucleotide similarity in the S1 gene is only about 57%-61% when compared to any other known GI-GVII IBV genotype and lineage. With nucleotide identity in the S1 gene of approximately 80%, the closest related strain in the National Center for Biotechnology Information database (as of March 15, 2020) is the North American PA/1220/98 isolate (AY789942) designated as a unique variant by Valastro et al. in 2016. Due to its divergence from other IBV strains, we propose that strain, designated IB80, is the type strain of a novel IBV genotype GVIII. So far, IB80 has been detected in commercial layer and broiler parent flocks, frequently showing severe drops in egg production as well as in broiler flocks in Europe and beyond.

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来源期刊
Avian Diseases
Avian Diseases 农林科学-兽医学
CiteScore
2.40
自引率
7.10%
发文量
80
审稿时长
3 months
期刊介绍: Avian Diseases is an international journal dedicated to publishing original basic or clinical research of the highest quality from various disciplines including microbiology, immunology, pathology and epidemiology. Papers on avian diseases relevant to etiology, pathogenesis, diagnosis, treatment, and control are accepted. Manuscripts dealing with avian species other than poultry will be considered only if the subject is relevant to poultry health.
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