{"title":"Deep genome skimming reveals the hybrid origin of <i>Pseudosasa gracilis</i> (Poaceae: Bambusoideae).","authors":"Xiang-Zhou Hu, Cen Guo, Sheng-Yuan Qin, De-Zhu Li, Zhen-Hua Guo","doi":"10.1016/j.pld.2023.06.001","DOIUrl":"10.1016/j.pld.2023.06.001","url":null,"abstract":"<p><p><i>Pseudosasa gracilis</i> (Poaceae: Bambusoideae) is a temperate woody bamboo species endemic to South-central China with a narrow distribution. Previous phylogenetic studies revealed an unexpected, isolated phylogenetic position of <i>Ps. gracilis</i>. Here we conducted phylogenomic analysis by sampling populations of <i>Ps. gracilis</i> and its sympatric species <i>Ps. nanunica</i> and <i>Sinosasa polytricha</i> reflecting different genomic signals, by deep genome skimming. Integrating molecular evidence from chloroplast genes and genome-wide SNPs, we deciphered the phylogenetic relationships of <i>Ps. gracilis</i>. Both plastid and nuclear data indicate that <i>Ps. gracilis</i> is more closely related to <i>Sinosasa</i>, which is discordant with the taxonomic treatment. To further explore this molecular-morphological conflict, we screened 411 \"perfect-copy\" syntenic genes to reconstruct phylogenies using both the concatenation and coalescent methods. We observed extensive discordance between gene trees and the putative species tree. A significant hybridization event was detected based on 411 genes from the D subgenome, showing <i>Ps. gracilis</i> was a hybrid descendant between <i>Sinosasa longiligulata</i> and <i>Ps. nanunica</i>, with 63.56% and 36.44% inheritance probabilities of each parent. Moreover, introgression events were detected in the C subgenome between <i>Ps. gracilis</i> and <i>S. polytricha</i> in the same distribution region. Our findings suggest that sympatric hybridization and introgression play a crucial role in the origin of <i>Ps. gracilis</i>. By providing an empirical example of bamboo of hybrid origin using comprehensive analyses based on genomic data from different inheritance systems and morphological characters, our study represents a step forward in understanding of reticulate evolution of bamboos.</p>","PeriodicalId":55333,"journal":{"name":"Boundary Value Problems","volume":"2014 1","pages":"344-352"},"PeriodicalIF":4.8,"publicationDate":"2023-06-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11119509/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"87838321","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"数学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Uniform stability of a strong time-delayed viscoelastic system with Balakrishnan–Taylor damping","authors":"Haiyan Li","doi":"10.1186/s13661-023-01749-8","DOIUrl":"https://doi.org/10.1186/s13661-023-01749-8","url":null,"abstract":"","PeriodicalId":55333,"journal":{"name":"Boundary Value Problems","volume":" ","pages":"1-16"},"PeriodicalIF":1.7,"publicationDate":"2023-05-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"43289455","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"数学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"A relation-theoretic set-valued version of Prešić-Ćirić theorem and applications","authors":"S. Shukla, Shweta Rai, Rahul Shukla","doi":"10.1186/s13661-023-01748-9","DOIUrl":"https://doi.org/10.1186/s13661-023-01748-9","url":null,"abstract":"","PeriodicalId":55333,"journal":{"name":"Boundary Value Problems","volume":" ","pages":"1-21"},"PeriodicalIF":1.7,"publicationDate":"2023-05-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"45619570","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"数学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Boundary Value ProblemsPub Date : 2023-05-29eCollection Date: 2024-01-01DOI: 10.1055/s-0043-1767799
Nur Eliana Tarmizi, Aneeza Wan Hamizan, Chong Sian Ng, Hardip Singh Gendeh, Lum Sai Guan, Farah Dayana Zahedi, Marina Mat Baki, Salina Husain
{"title":"The Nasal Endoscopic Features of Postnasal Drip: A Cross Sectional Study.","authors":"Nur Eliana Tarmizi, Aneeza Wan Hamizan, Chong Sian Ng, Hardip Singh Gendeh, Lum Sai Guan, Farah Dayana Zahedi, Marina Mat Baki, Salina Husain","doi":"10.1055/s-0043-1767799","DOIUrl":"10.1055/s-0043-1767799","url":null,"abstract":"<p><p><b>Introduction</b> Patients with chronic rhinitis suffer from postnasal drip (PND) but this symptom is not well addressed. Nasal endoscopy may aid in identifying PND. Well described endoscopic features of PND are presence of secretions in the posterior nasal cavity, diffuse erythema, and hemorrhagic spots in the nasopharynx, but these have not been formally studied. <b>Objectives</b> The present study aims to assess the association of nasal endoscopic features with PND among rhinitis patients. This will guide clinicians to interpret the nasal endoscopic findings appropriately. <b>Methods</b> Adults (≥ 18 years old) with chronic rhinitis were consecutively recruited at an Otorhinolaryngology outpatient clinic in a tertiary referral center. The patients were grouped into either \"Rhinitis with PND\" or \"Rhinitis only.\" The endoscopic features of PND were scored as: Secretions in the posterior nasal cavity (yes/no), erythema in the nasopharynx (none, roof only, diffuse), hemorrhagic spots (yes/no), then were compared between groups. <b>Results</b> There were 98 patients included (age 32.32 ± 11.33 years old, 61.2% female, 61.2% PND). Presence of secretions in the posterior nasal cavity was associated with PND (\"Rhinitis with PND\" versus \"Rhinitis only,\" 78.3 versus 55.3; <i>p</i> = 0.02; Odds ratio: 2.81; 95% confidence interval [CI]: 1.08-7.32). Diffuse erythema of the nasopharynx was more frequent in \"rhinitis only\" compared with those with PND (76.3 versus 53.3%; <i>p</i> = 0.02). Hemorrhagic spots were equally present in both groups (11.7 versus 18.4%; <i>p</i> = 0.35). <b>Conclusion</b> Presence of secretions in the posterior nasal cavity may indicate bothersome PND among patients with rhinitis. Diffuse erythema of the nasopharynx and hemorrhagic spots are a nonspecific sign of inflammation.</p>","PeriodicalId":55333,"journal":{"name":"Boundary Value Problems","volume":"2014 1","pages":"e95-e100"},"PeriodicalIF":1.1,"publicationDate":"2023-05-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10843929/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"88103791","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"数学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Dynamics properties for a viscoelastic Kirchhoff-type equation with nonlinear boundary damping and source terms","authors":"M. Saker, N. Boumaza, Billel Gheraibia","doi":"10.1186/s13661-023-01746-x","DOIUrl":"https://doi.org/10.1186/s13661-023-01746-x","url":null,"abstract":"","PeriodicalId":55333,"journal":{"name":"Boundary Value Problems","volume":" ","pages":"1-19"},"PeriodicalIF":1.7,"publicationDate":"2023-05-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"46001325","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"数学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Generalized fractional calculus in Banach spaces and applications to existence results for boundary value problems","authors":"H. A. Salem, M. Cichoń, W. Shammakh","doi":"10.1186/s13661-023-01745-y","DOIUrl":"https://doi.org/10.1186/s13661-023-01745-y","url":null,"abstract":"","PeriodicalId":55333,"journal":{"name":"Boundary Value Problems","volume":"2023 1","pages":"1-30"},"PeriodicalIF":1.7,"publicationDate":"2023-05-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"41747068","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"数学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Manigandan Murugesan, Subramanian Muthaiah, J. Alzabut, T. Nandha Gopal
{"title":"Existence and H-U stability of a tripled system of sequential fractional differential equations with multipoint boundary conditions","authors":"Manigandan Murugesan, Subramanian Muthaiah, J. Alzabut, T. Nandha Gopal","doi":"10.1186/s13661-023-01744-z","DOIUrl":"https://doi.org/10.1186/s13661-023-01744-z","url":null,"abstract":"","PeriodicalId":55333,"journal":{"name":"Boundary Value Problems","volume":" ","pages":"1-29"},"PeriodicalIF":1.7,"publicationDate":"2023-05-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"47476926","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"数学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
K. Shah, Gauhar Ali, K. Ansari, T. Abdeljawad, M. Meganathan, Bahaaeldin Abdalla
{"title":"On qualitative analysis of boundary value problem of variable order fractional delay differential equations","authors":"K. Shah, Gauhar Ali, K. Ansari, T. Abdeljawad, M. Meganathan, Bahaaeldin Abdalla","doi":"10.1186/s13661-023-01728-z","DOIUrl":"https://doi.org/10.1186/s13661-023-01728-z","url":null,"abstract":"","PeriodicalId":55333,"journal":{"name":"Boundary Value Problems","volume":" ","pages":"1-15"},"PeriodicalIF":1.7,"publicationDate":"2023-05-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"48628805","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"数学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Correction to: Infinitely many solutions for a class of fractional Schrödinger equations with sign-changing weight functions","authors":"Yongpeng Chen, Bao Jin","doi":"10.1186/s13661-023-01739-w","DOIUrl":"https://doi.org/10.1186/s13661-023-01739-w","url":null,"abstract":"","PeriodicalId":55333,"journal":{"name":"Boundary Value Problems","volume":"2023 1","pages":"1"},"PeriodicalIF":1.7,"publicationDate":"2023-05-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"42097714","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"数学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}