arXiv - QuanBio - Tissues and Organs最新文献

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Targeting of chondrocyte plasticity via connexin43 modulation attenuates cellular senescence and fosters a pro-regenerative environment in osteoarthritis 通过调控 connexin43 靶向软骨细胞的可塑性,减轻细胞衰老并促进骨关节炎的再生环境
arXiv - QuanBio - Tissues and Organs Pub Date : 2024-02-01 DOI: arxiv-2402.00624
Marta Varela-Eirin, Adrian Varela-Vazquez, Amanda Guitian-Caamano, Carlos Luis Paino, Virginia Mato, Raquel Largo, Trond Aasen, Arantxa Tabernero, Eduardo Fonseca, Mustapha Kandouz, Jose Ramon Caeiro, Alfonso Blanco, Maria D. Mayan
{"title":"Targeting of chondrocyte plasticity via connexin43 modulation attenuates cellular senescence and fosters a pro-regenerative environment in osteoarthritis","authors":"Marta Varela-Eirin, Adrian Varela-Vazquez, Amanda Guitian-Caamano, Carlos Luis Paino, Virginia Mato, Raquel Largo, Trond Aasen, Arantxa Tabernero, Eduardo Fonseca, Mustapha Kandouz, Jose Ramon Caeiro, Alfonso Blanco, Maria D. Mayan","doi":"arxiv-2402.00624","DOIUrl":"https://doi.org/arxiv-2402.00624","url":null,"abstract":"Osteoarthritis (OA), a chronic disease characterized by articular cartilage\u0000degeneration, is a leading cause of disability and pain worldwide. In OA,\u0000chondrocytes in cartilage undergo phenotypic changes and senescence,\u0000restricting cartilage regeneration and favouring disease progression. Similar\u0000to other wound-healing disorders, chondrocytes from OA patients show a chronic\u0000increase in the gap junction channel protein connexin43 (Cx43), which regulates\u0000signal transduction through the exchange of elements or recruitment/release of\u0000signalling factors. Although immature or stem-like cells are present in\u0000cartilage from OA patients, their origin and role in disease progression are\u0000unknown. In this study, we found that Cx43 acts as a positive regulator of\u0000chondrocyte-mesenchymal transition. Downregulation of either Cx43 by\u0000CRISPR/Cas9 or Cx43-mediated gap junctional intercellular communication (GJIC)\u0000by carbenoxolone treatment triggered rediferentiation of osteoarthritic\u0000chondrocytes into a more differentiated state, associated with decreased\u0000synthesis of MMPs and proinflammatory factors, and reduced senescence. We have\u0000identified causal Cx43-sensitive circuit in chondrocytes that regulates\u0000dedifferentiation, redifferentiation and senescence. We propose that\u0000chondrocytes undergo chondrocyte-mesenchymal transition where increased\u0000Cx43-mediated GJIC during OA facilitates Twist-1 nuclear translocation as a\u0000novel mechanism involved in OA progression. These findings support the use of\u0000Cx43 as an appropriate therapeutic target to halt OA progression and to promote\u0000cartilage regeneration.","PeriodicalId":501572,"journal":{"name":"arXiv - QuanBio - Tissues and Organs","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139662279","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Cell spheroid viscoelasticity is deformation-dependent 细胞球体的粘弹性取决于形变
arXiv - QuanBio - Tissues and Organs Pub Date : 2024-01-30 DOI: arxiv-2401.17155
Ruben C. Boot, Anouk van der Net, Christos Gogou, Pranav Mehta, Dimphna H. Meijer, Gijsje H. Koenderink, Pouyan E. Boukany
{"title":"Cell spheroid viscoelasticity is deformation-dependent","authors":"Ruben C. Boot, Anouk van der Net, Christos Gogou, Pranav Mehta, Dimphna H. Meijer, Gijsje H. Koenderink, Pouyan E. Boukany","doi":"arxiv-2401.17155","DOIUrl":"https://doi.org/arxiv-2401.17155","url":null,"abstract":"Tissue surface tension influences cell sorting and tissue fusion. Earlier\u0000mechanical studies suggest that multicellular spheroids actively reinforce\u0000their surface tension with applied force. Here we study this open question\u0000through high-throughput microfluidic micropipette aspiration measurements on\u0000cell spheroids to identify the role of force duration and cell contractility.\u0000We find that larger spheroid deformations lead to faster cellular retraction\u0000once the pressure is released, regardless of the applied force and cellular\u0000contractility. These new insights demonstrate that spheroid viscoelasticity is\u0000deformation-dependent and challenge whether surface tension truly reinforces.","PeriodicalId":501572,"journal":{"name":"arXiv - QuanBio - Tissues and Organs","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-01-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139647973","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Coronary CTA and Quantitative Cardiac CT Perfusion (CCTP) in Coronary Artery Disease 冠状动脉 CTA 和冠状动脉疾病的定量心脏 CT 灌注 (CCTP)
arXiv - QuanBio - Tissues and Organs Pub Date : 2024-01-30 DOI: arxiv-2401.17433
Hao Wu, Yingnan Song, Ammar Hoori, Ananya Subramaniam, Juhwan Lee, Justin Kim, Tao Hu, Sadeer Al-Kindi, Wei-Ming Huang, Chun-Ho Yun, Chung-Lieh Hung, Sanjay Rajagopalan, David L. Wilson
{"title":"Coronary CTA and Quantitative Cardiac CT Perfusion (CCTP) in Coronary Artery Disease","authors":"Hao Wu, Yingnan Song, Ammar Hoori, Ananya Subramaniam, Juhwan Lee, Justin Kim, Tao Hu, Sadeer Al-Kindi, Wei-Ming Huang, Chun-Ho Yun, Chung-Lieh Hung, Sanjay Rajagopalan, David L. Wilson","doi":"arxiv-2401.17433","DOIUrl":"https://doi.org/arxiv-2401.17433","url":null,"abstract":"We assessed the benefit of combining stress cardiac CT perfusion (CCTP)\u0000myocardial blood flow (MBF) with coronary CT angiography (CCTA) using our\u0000innovative CCTP software. By combining CCTA and CCTP, one can uniquely identify\u0000a flow limiting stenosis (obstructive-lesion + low-MBF) versus MVD\u0000(no-obstructive-lesion + low-MBF. We retrospectively evaluated 104 patients\u0000with suspected CAD, including 18 with diabetes, who underwent CCTA+CCTP. Whole\u0000heart and territorial MBF was assessed using our automated pipeline for CCTP\u0000analysis that included beam hardening correction; temporal scan registration;\u0000automated segmentation; fast, accurate, robust MBF estimation; and\u0000visualization. Stenosis severity was scored using the CCTA\u0000coronary-artery-disease-reporting-and-data-system (CAD-RADS), with obstructive\u0000stenosis deemed as CAD-RADS>=3. We established a threshold MBF\u0000(MBF=199-mL/min-100g) for normal perfusion. In patients with CAD-RADS>=3,\u000028/37(76%) patients showed ischemia in the corresponding territory. Two\u0000patients with obstructive disease had normal perfusion, suggesting collaterals\u0000and/or a hemodynamically insignificant stenosis. Among diabetics, 10 of 18\u0000(56%) demonstrated diffuse ischemia consistent with MVD. Among non-diabetics,\u0000only 6% had MVD. Sex-specific prevalence of MVD was 21%/24% (M/F). On a\u0000per-vessel basis (n=256), MBF showed a significant difference between\u0000territories with and without obstructive stenosis (165 +/- 61 mL/min-100g vs.\u0000274 +/- 62 mL/min-100g, p <0.05). A significant and negative rank correlation\u0000(rho=-0.53, p<0.05) between territory MBF and CAD-RADS was seen. CCTA in\u0000conjunction with a new automated quantitative CCTP approach can augment the\u0000interpretation of CAD, enabling the distinction of ischemia due to obstructive\u0000lesions and MVD.","PeriodicalId":501572,"journal":{"name":"arXiv - QuanBio - Tissues and Organs","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-01-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139659181","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Influence of Material Parameter Variability on the Predicted Coronary Artery Biomechanical Environment via Uncertainty Quantification 通过不确定性量化分析材料参数变异性对预测冠状动脉生物力学环境的影响
arXiv - QuanBio - Tissues and Organs Pub Date : 2024-01-26 DOI: arxiv-2401.15047
Caleb C. Berggren, David Jiang, Y. F. Jack Wang, Jake A. Bergquist, Lindsay C. Rupp, Zexin Liu, Rob S. MacLeod, Akil Narayan, Lucas H. Timmins
{"title":"Influence of Material Parameter Variability on the Predicted Coronary Artery Biomechanical Environment via Uncertainty Quantification","authors":"Caleb C. Berggren, David Jiang, Y. F. Jack Wang, Jake A. Bergquist, Lindsay C. Rupp, Zexin Liu, Rob S. MacLeod, Akil Narayan, Lucas H. Timmins","doi":"arxiv-2401.15047","DOIUrl":"https://doi.org/arxiv-2401.15047","url":null,"abstract":"Central to the clinical adoption of patient-specific modeling strategies is\u0000demonstrating that simulation results are reliable and safe. Simulation\u0000frameworks must be robust to uncertainty in model input(s), and levels of\u0000confidence should accompany results. In this study we applied a coupled\u0000uncertainty quantification-finite element (FE) framework to understand the\u0000impact of uncertainty in vascular material properties on variability in\u0000predicted stresses. Univariate probability distributions were fit to material\u0000parameters derived from layer-specific mechanical behavior testing of human\u0000coronary tissue. Parameters were assumed to be probabilistically independent,\u0000allowing for efficient parameter ensemble sampling. In an idealized coronary\u0000artery geometry, a forward FE model for each parameter ensemble was created to\u0000predict tissue stresses under physiologic loading. An emulator was constructed\u0000within the UncertainSCI software using polynomial chaos techniques, and\u0000statistics and sensitivities were directly computed. Results demonstrated that\u0000material parameter uncertainty propagates to variability in predicted stresses\u0000across the vessel wall, with the largest dispersions in stress within the\u0000adventitial layer. Variability in stress was most sensitive to uncertainties in\u0000the anisotropic component of the strain energy function. Unary and binary\u0000interactions within the adventitial layer were the main contributors to stress\u0000variance, and the leading factor in stress variability was uncertainty in the\u0000stress-like material parameter summarizing contribution of the embedded fibers\u0000to the overall artery stiffness. Results from a patient-specific coronary model\u0000confirmed many of these findings. Collectively, this highlights the impact of\u0000material property variation on predicted artery stresses and presents a\u0000pipeline to explore and characterize uncertainty in computational biomechanics.","PeriodicalId":501572,"journal":{"name":"arXiv - QuanBio - Tissues and Organs","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-01-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139587357","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
An innovative in silico model of the oral mucosa reveals the impact of extracellular spaces on chemical permeation through epithelium 创新的口腔黏膜硅学模型揭示了细胞外空间对上皮细胞化学渗透的影响
arXiv - QuanBio - Tissues and Organs Pub Date : 2024-01-26 DOI: arxiv-2401.14928
Sean M. Edwards, Amy L. Harding, Joseph A. Leedale, Steve D. Webb, Helen E. Colley, Craig Murdoch, Rachel N. Bearon
{"title":"An innovative in silico model of the oral mucosa reveals the impact of extracellular spaces on chemical permeation through epithelium","authors":"Sean M. Edwards, Amy L. Harding, Joseph A. Leedale, Steve D. Webb, Helen E. Colley, Craig Murdoch, Rachel N. Bearon","doi":"arxiv-2401.14928","DOIUrl":"https://doi.org/arxiv-2401.14928","url":null,"abstract":"In pharmaceutical therapeutic design or toxicology, accurately predicting the\u0000permeation of chemicals through human epithelial tissues is crucial, where\u0000permeation is significantly influenced by the tissue's cellular architecture.\u0000Current mathematical models for multi-layered epithelium such as the oral\u0000mucosa only use simplistic 'bricks and mortar' geometries and therefore do not\u0000account for the complex cellular architecture of these tissues at the\u0000microscale level, such as the extensive plasma membrane convolutions that\u0000define the extracellular spaces between cells. Chemicals often permeate tissues\u0000via this paracellular route, meaning that permeation is underestimated. To\u0000address this, measurements of human buccal mucosal tissue were conducted to\u0000ascertain the width and tortuosity of extracellular spaces across the\u0000epithelium. Using mechanistic mathematical modelling, we show that the\u0000convoluted geometry of extracellular spaces significantly impacts chemical\u0000permeation and that this can be approximated, provided that extracellular\u0000tortuosity is accounted for. We next developed an advanced physically-relevant\u0000in silico model of oral mucosal chemical permeation using partial differential\u0000equations, fitted to chemical permeation in vitro assays on tissue-engineered\u0000human oral mucosa. Tissue geometries were measured and captured in silico, and\u0000permeation examined and predicted for chemicals with different physicochemical\u0000properties. The effect of altering the extracellular space to mimic permeation\u0000enhancers was also assessed by perturbing the in silico model. This novel in\u0000vitro-in silico approach has the potential to expedite pharmaceutical\u0000innovation for testing oromucosal chemical permeation, providing a more\u0000accurate, physiologically-relevant model which can reduce animal testing with\u0000early screening based on chemical properties.","PeriodicalId":501572,"journal":{"name":"arXiv - QuanBio - Tissues and Organs","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-01-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139587172","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Cardiac Digital Twin Pipeline for Virtual Therapy Evaluation 用于虚拟疗法评估的心脏数字孪生管道
arXiv - QuanBio - Tissues and Organs Pub Date : 2024-01-18 DOI: arxiv-2401.10029
Julia Camps, Zhinuo Jenny Wang, Ruben Doste, Maxx Holmes, Brodie Lawson, Jakub Tomek, Kevin Burrage, Alfonso Bueno-Orovio, Blanca Rodriguez
{"title":"Cardiac Digital Twin Pipeline for Virtual Therapy Evaluation","authors":"Julia Camps, Zhinuo Jenny Wang, Ruben Doste, Maxx Holmes, Brodie Lawson, Jakub Tomek, Kevin Burrage, Alfonso Bueno-Orovio, Blanca Rodriguez","doi":"arxiv-2401.10029","DOIUrl":"https://doi.org/arxiv-2401.10029","url":null,"abstract":"Cardiac digital twins are computational tools capturing key functional and\u0000anatomical characteristics of patient hearts for investigating disease\u0000phenotypes and predicting responses to therapy. When paired with large-scale\u0000computational resources and large clinical datasets, digital twin technology\u0000can enable virtual clinical trials on virtual cohorts to fast-track therapy\u0000development. Here, we present an automated pipeline for personalising\u0000ventricular anatomy and electrophysiological function based on routinely\u0000acquired cardiac magnetic resonance (CMR) imaging data and the standard 12-lead\u0000electrocardiogram (ECG). Using CMR-based anatomical models, a sequential\u0000Monte-Carlo approximate Bayesian computational inference method is extended to\u0000infer electrical activation and repolarisation characteristics from the ECG.\u0000Fast simulations are conducted with a reaction-Eikonal model, including the\u0000Purkinje network and biophysically-detailed subcellular ionic current dynamics\u0000for repolarisation. For each patient, parameter uncertainty is represented by\u0000inferring a population of ventricular models rather than a single one, which\u0000means that parameter uncertainty can be propagated to therapy evaluation.\u0000Furthermore, we have developed techniques for translating from reaction-Eikonal\u0000to monodomain simulations, which allows more realistic simulations of cardiac\u0000electrophysiology. The pipeline is demonstrated in a healthy female subject,\u0000where our inferred reaction-Eikonal models reproduced the patient's ECG with a\u0000Pearson's correlation coefficient of 0.93, and the translated monodomain\u0000simulations have a correlation coefficient of 0.89. We then apply the effect of\u0000Dofetilide to the monodomain population of models for this subject and show\u0000dose-dependent QT and T-peak to T-end prolongations that are in keeping with\u0000large population drug response data.","PeriodicalId":501572,"journal":{"name":"arXiv - QuanBio - Tissues and Organs","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-01-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139500644","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Homogenisation of nonlinear blood flow in periodic networks: the limit of small haematocrit heterogeneity 周期性网络中非线性血流的均质化:小血细胞比容异质性的极限
arXiv - QuanBio - Tissues and Organs Pub Date : 2024-01-16 DOI: arxiv-2401.10932
Y. Ben-Ami, B. D. Wood, J. M. Pitt-Francis, P. K. Maini, H. M. Byrne
{"title":"Homogenisation of nonlinear blood flow in periodic networks: the limit of small haematocrit heterogeneity","authors":"Y. Ben-Ami, B. D. Wood, J. M. Pitt-Francis, P. K. Maini, H. M. Byrne","doi":"arxiv-2401.10932","DOIUrl":"https://doi.org/arxiv-2401.10932","url":null,"abstract":"In this work we develop a homogenisation methodology to upscale mathematical\u0000descriptions of microcirculatory blood flow from the microscale (where\u0000individual vessels are resolved) to the macroscopic (or tissue) scale. Due to\u0000the assumed two-phase nature of blood and specific features of red blood cells\u0000(RBCs), mathematical models for blood flow in the microcirculation are highly\u0000nonlinear, coupling the flow and RBC concentrations (haematocrit). In contrast\u0000to previous works which accomplished blood-flow homogenisation by assuming that\u0000the haematocrit level remains constant, here we allow for spatial heterogeneity\u0000in the haematocrit concentration and thus begin with a nonlinear microscale\u0000model. We simplify the analysis by considering the limit of small haematocrit\u0000heterogeneity which prevails when variations in haematocrit concentration\u0000between neighbouring vessels are small. Homogenisation results in a system of\u0000coupled, nonlinear partial differential equations describing the flow and\u0000haematocrit transport at the macroscale, in which a nonlinear Darcy-type model\u0000relates the flow and pressure gradient via a haematocrit-dependent permeability\u0000tensor. During the analysis we obtain further that haematocrit transport at the\u0000macroscale is governed by a purely advective equation. Applying the theory to\u0000particular examples of two- and three-dimensional geometries of periodic\u0000networks, we calculate the effective permeability tensor associated with blood\u0000flow in these vascular networks. We demonstrate how the statistical\u0000distribution of vessel lengths and diameters, together with the average\u0000haematocrit level, affect the statistical properties of the macroscopic\u0000permeability tensor. These data can be used to simulate blood flow and\u0000haematocrit transport at the macroscale.","PeriodicalId":501572,"journal":{"name":"arXiv - QuanBio - Tissues and Organs","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-01-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139552320","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Phenotyping calcification in vascular tissues using artificial intelligence 利用人工智能对血管组织中的钙化进行表型分析
arXiv - QuanBio - Tissues and Organs Pub Date : 2024-01-15 DOI: arxiv-2401.07825
Mehdi Ramezanpour, Anne M. Robertson, Yasutaka Tobe, Xiaowei Jia, Juan R. Cebral
{"title":"Phenotyping calcification in vascular tissues using artificial intelligence","authors":"Mehdi Ramezanpour, Anne M. Robertson, Yasutaka Tobe, Xiaowei Jia, Juan R. Cebral","doi":"arxiv-2401.07825","DOIUrl":"https://doi.org/arxiv-2401.07825","url":null,"abstract":"Vascular calcification is implicated as an important factor in major adverse\u0000cardiovascular events (MACE), including heart attack and stroke. A controversy\u0000remains over how to integrate the diverse forms of vascular calcification into\u0000clinical risk assessment tools. Even the commonly used calcium score for\u0000coronary arteries, which assumes risk scales positively with total\u0000calcification, has important inconsistencies. Fundamental studies are needed to\u0000determine how risk is influenced by the diverse calcification phenotypes.\u0000However, studies of these kinds are hindered by the lack of high-throughput,\u0000objective, and non-destructive tools for classifying calcification in imaging\u0000data sets. Here, we introduce a new classification system for phenotyping\u0000calcification along with a semi-automated, non-destructive pipeline that can\u0000distinguish these phenotypes in even atherosclerotic tissues. The pipeline\u0000includes a deep-learning-based framework for segmenting lipid pools in noisy\u0000micro-CT images and an unsupervised clustering framework for categorizing\u0000calcification based on size, clustering, and topology. This approach is\u0000illustrated for five vascular specimens, providing phenotyping for thousands of\u0000calcification particles across as many as 3200 images in less than seven hours.\u0000Average Dice Similarity Coefficients of 0.96 and 0.87 could be achieved for\u0000tissue and lipid pool, respectively, with training and validation needed on\u0000only 13 images despite the high heterogeneity in these tissues. By introducing\u0000an efficient and comprehensive approach to phenotyping calcification, this work\u0000enables large-scale studies to identify a more reliable indicator of the risk\u0000of cardiovascular events, a leading cause of global mortality and morbidity.","PeriodicalId":501572,"journal":{"name":"arXiv - QuanBio - Tissues and Organs","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-01-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139483144","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Comprehensive Joint Modeling of First-Line Therapeutics in Non-Small Cell Lung Cancer 非小细胞肺癌一线治疗药物的综合联合建模
arXiv - QuanBio - Tissues and Organs Pub Date : 2024-01-15 DOI: arxiv-2401.07719
Benjamin SchneiderISU, Sébastien BenzekryCOMPO, Jonathan MochelISU
{"title":"Comprehensive Joint Modeling of First-Line Therapeutics in Non-Small Cell Lung Cancer","authors":"Benjamin SchneiderISU, Sébastien BenzekryCOMPO, Jonathan MochelISU","doi":"arxiv-2401.07719","DOIUrl":"https://doi.org/arxiv-2401.07719","url":null,"abstract":"First-line antiproliferatives for non-small cell lung cancer (NSCLC) have a\u0000relatively high failure rate due to high intrinsic resistance rates and\u0000acquired resistance rates to therapy. 57% patients are diagnosed in late-stage\u0000disease due to the tendency of early-stage NSCLC to be asymptomatic. For\u0000patients first diagnosed with metastatic disease the 5-year survival rate is\u0000approximately 5%. To help accelerate the development of novel therapeutics and\u0000computer-based tools for optimizing individual therapy, we have collated data\u0000from 11 different clinical trials in NSCLC and developed a semi-mechanistic,\u0000clinical model of NSCLC growth and pharmacodynamics relative to the various\u0000therapeutics represented in the study. In this study, we have produced\u0000extremely precise estimates of clinical parameters fundamental to cancer\u0000modeling such as the rate of acquired resistance to various pharmaceuticals,\u0000the relationship between drug concentration and rate of cancer cell death, as\u0000well as the fine temporal dynamics of anti-VEGF therapy. In the simulation sets\u0000documented in this study, we have used the model to make meaningful\u0000descriptions of efficacy gain in making bevacizumab-antiproliferative\u0000combination therapy sequential, over a series of days, rather than concurrent.","PeriodicalId":501572,"journal":{"name":"arXiv - QuanBio - Tissues and Organs","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-01-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139483203","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Iron role paradox in nerve degeneration and regeneration 铁在神经变性和再生中的作用悖论
arXiv - QuanBio - Tissues and Organs Pub Date : 2024-01-13 DOI: arxiv-2401.07016
Samira Bolandghamat, Morteza Behnam-Rassouli
{"title":"Iron role paradox in nerve degeneration and regeneration","authors":"Samira Bolandghamat, Morteza Behnam-Rassouli","doi":"arxiv-2401.07016","DOIUrl":"https://doi.org/arxiv-2401.07016","url":null,"abstract":"Iron accumulates in the neural tissue during peripheral nerve degeneration.\u0000Some studies have already been suggested that iron facilitates Wallerian\u0000degeneration (WD) events such as Schwann cell de-differentiation. On the other\u0000hand, intracellular iron levels remain elevated during nerve regeneration and\u0000gradually decrease. Iron enhances Schwann cell differentiation and axonal\u0000outgrowth. Therefore, there seems to be a paradox in the role of iron during\u0000nerve degeneration and regeneration. We explain this contradiction by\u0000suggesting that the increase in intracellular iron concentration during\u0000peripheral nerve degeneration is likely to prepare neural cells for the\u0000initiation of regeneration. Changes in iron levels are the result of changes in\u0000the expression of iron homeostasis proteins. In this review, we will first\u0000discuss the changes in the iron/iron homeostasis protein levels during\u0000peripheral nerve degeneration and regeneration and then explain how iron is\u0000related to nerve regeneration. This data may help better understand the\u0000mechanisms of peripheral nerve repair and find a solution to prevent or slow\u0000the progression of peripheral neuropathies.","PeriodicalId":501572,"journal":{"name":"arXiv - QuanBio - Tissues and Organs","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-01-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139483145","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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