Taxonomy of Hyphodermella: a case study to show that simple phylogenies cannot always accurately place species in appropriate genera.

IF 5.2 1区 生物学 Q1 MYCOLOGY
Shan Shen, Shi-Liang Liu, Li-Wei Zhou
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引用次数: 0

Abstract

The genus is a special and crucial taxonomic rank compared with others above the species level, because a species has to be placed in a certain genus instead of any other higher ranks. With more and more new species being described, the placements of their generic position are sometimes incorrect due to the simple phylogenies resulting from inappropriate sampling. Here, we focus on the taxonomy of a small wood-inhabiting fungal genus Hyphodermella. With the most comprehensive sampling to date, the phylogenetic position of Hyphodermella within Phanerochaetaceae is rearranged by employing the same ITS and nLSU regions as in previous studies and also the ITS, nLSU, rpb1, rpb2 and tef1α regions. Three species are excluded from Hyphodermella: H. poroides is placed in a newly introduced monotypic genus Pseudohyphodermella, while H. aurantiaca and H. zixishanensis are transferred to Roseograndinia. Hyphodermella suiae is described as a new species from South China and Vietnam. Keys to eight species in Hyphodermella and five in Roseograndinia are provided. Beyond solving the taxonomic issue of Hyphodermella itself, the current study also aims to suggest that all fungal taxonomists especially beginners should keep in mind to sample as many comprehensive taxa as possible in phylogenetic analyses.

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Hyphodermella的分类:一个案例研究,说明简单的系统发育并不能总是准确地将物种归入适当的属。
与种以上的其他级别相比,属是一个特殊而关键的分类级别,因为一个物种必须归入某个属,而不是其他更高的级别。随着越来越多的新物种被描述出来,由于取样不当造成的简单系统发育,其属的位置有时并不正确。在此,我们重点讨论栖息于林木中的小型真菌属 Hyphodermella 的分类问题。通过迄今为止最全面的取样,我们利用与以往研究相同的 ITS 和 nLSU 区域,以及 ITS、nLSU、rpb1、rpb2 和 tef1α 区域,重新安排了 Hyphodermella 在 Phanerochaetaceae 中的系统发生位置。从 Hyphodermella 中剔除了三个种:H. poroides 被归入新引入的单型属 Pseudohyphodermella,H. aurantiaca 和 H. zixishanensis 被归入 Roseograndinia。Hyphodermella suiae 被描述为产于华南和越南的一个新种。提供了 Hyphodermella 中 8 个种和 Roseograndinia 中 5 个种的钥匙。除了解决 Hyphodermella 本身的分类问题外,本研究还旨在建议所有真菌分类学家,尤其是初学者在进行系统发育分析时应牢记尽可能多地采集综合分类群的样本。
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来源期刊
Ima Fungus
Ima Fungus Agricultural and Biological Sciences-Agricultural and Biological Sciences (miscellaneous)
CiteScore
11.00
自引率
3.70%
发文量
18
审稿时长
20 weeks
期刊介绍: The flagship journal of the International Mycological Association. IMA Fungus is an international, peer-reviewed, open-access, full colour, fast-track journal. Papers on any aspect of mycology are considered, and published on-line with final pagination after proofs have been corrected; they are then effectively published under the International Code of Nomenclature for algae, fungi, and plants. The journal strongly supports good practice policies, and requires voucher specimens or cultures to be deposited in a public collection with an online database, DNA sequences in GenBank, alignments in TreeBASE, and validating information on new scientific names, including typifications, to be lodged in MycoBank. News, meeting reports, personalia, research news, correspondence, book news, and information on forthcoming international meetings are included in each issue
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