Distinguishable DNA methylation defines a cardiac-specific epigenetic clock.

IF 5.7 2区 医学 Q1 Medicine
A Mongelli, S Panunzi, M Nesta, M Gottardi Zamperla, S Atlante, V Barbi, V Mongiardini, F Ferraro, S De Martino, L Cis, A Re, S Maltese, T Bachetti, M T La Rovere, F Martelli, M Pesce, S Nanni, M Massetti, A Pontecorvi, A Farsetti, C Gaetano
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引用次数: 2

Abstract

Background: The present study investigates whether epigenetic differences emerge in the heart of patients undergoing cardiac surgery for an aortic valvular replacement (AVR) or coronary artery bypass graft (CABG). An algorithm is also established to determine how the pathophysiological condition might influence the human biological cardiac age.

Results: Blood samples and cardiac auricles were collected from patients who underwent cardiac procedures: 94 AVR and 289 CABG. The CpGs from three independent blood-derived biological clocks were selected to design a new blood- and the first cardiac-specific clocks. Specifically, 31 CpGs from six age-related genes, ELOVL2, EDARADD, ITGA2B, ASPA, PDE4C, and FHL2, were used to construct the tissue-tailored clocks. The best-fitting variables were combined to define new cardiac- and blood-tailored clocks validated through neural network analysis and elastic regression. In addition, telomere length (TL) was measured by qPCR. These new methods revealed a similarity between chronological and biological age in the blood and heart; the average TL was significantly higher in the heart than in the blood. In addition, the cardiac clock discriminated well between AVR and CABG and was sensitive to cardiovascular risk factors such as obesity and smoking. Moreover, the cardiac-specific clock identified an AVR patient's subgroup whose accelerated bioage correlated with the altered ventricular parameters, including left ventricular diastolic and systolic volume.

Conclusion: This study reports on applying a method to evaluate the cardiac biological age revealing epigenetic features that separate subgroups of AVR and CABG.

Abstract Image

Abstract Image

Abstract Image

可区分的DNA甲基化定义了心脏特异性表观遗传时钟。
背景:本研究调查了接受主动脉瓣置换术(AVR)或冠状动脉搭桥手术(CABG)的患者心脏是否出现表观遗传差异。还建立了一种算法来确定病理生理状况如何影响人类生物心脏年龄。结果:收集了接受心脏手术的患者的血液样本和心廓:94例AVR和289例CABG。从三个独立的血液来源的生物钟中选择CpGs来设计一种新的血液-也是第一个心脏特异性时钟。具体来说,来自6个年龄相关基因ELOVL2、EDARADD、ITGA2B、ASPA、PDE4C和FHL2的31个CpGs被用于构建组织定制时钟。结合最佳拟合变量定义新的心脏和血液定制时钟,通过神经网络分析和弹性回归验证。此外,用qPCR法测定端粒长度(TL)。这些新方法揭示了血液和心脏中实足年龄和生物年龄之间的相似性;心脏中的平均TL明显高于血液中的TL。此外,心脏时钟可以很好地区分AVR和CABG,并且对肥胖和吸烟等心血管危险因素敏感。此外,心脏特异性时钟确定了AVR患者亚组,其生物年龄加速与心室参数改变相关,包括左心室舒张和收缩容积。结论:本研究报道了一种揭示AVR和CABG亚群分离的表观遗传特征的心脏生物学年龄评估方法。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Clinical Epigenetics
Clinical Epigenetics Biochemistry, Genetics and Molecular Biology-Developmental Biology
CiteScore
8.90
自引率
5.30%
发文量
150
审稿时长
12 weeks
期刊介绍: Clinical Epigenetics, the official journal of the Clinical Epigenetics Society, is an open access, peer-reviewed journal that encompasses all aspects of epigenetic principles and mechanisms in relation to human disease, diagnosis and therapy. Clinical trials and research in disease model organisms are particularly welcome.
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