Assessment of genetic diversity among India Ginseng, Withania somnifera (L) Dunal using RAPD and ISSR markers

Shahana Khan, R. Shah
{"title":"Assessment of genetic diversity among India Ginseng, Withania somnifera (L) Dunal using RAPD and ISSR markers","authors":"Shahana Khan, R. Shah","doi":"10.19071/RIB.2016.V7.2818","DOIUrl":null,"url":null,"abstract":"Withania somnifera is commonly known as Indian Ginseng or Ashwagandha which is listed highly medicinal plant in Ayurveda for its wide range of medicinal use. Genetic diversity among 16 genotypes of Withania somnifera collected from four different regions viz. Lucknow, Nimuch, Karnataka and Mumbai was studied using RAPD and ISSR techniques. The ISSR and RAPD together produced 89 bands across 16 genotypes of W. somnifera of which 39 were polymorphic showing 47.89% polymorphism. Over 99% of the RAPD and ISSR fragments were reproducible in the present experiment. There was 90% uniformity within the population. The neighbor joining tree also confirmed a clear grouping and differentiation based on populations of origin i.e. samples were grouped on the basis of their regions of origin. The dendrogram reveals that outgroup of W. somnifera Karnataka origin are evolutionarily related to W. somnifera Nimuch group varieties and W. somnifera Lucknow and Mumbai group varieties are evolutionarily closely related. Within population analysis of Lucknow and Nimuch location showed two sub groups of two lines each showing slight diversity. Plants from Karnataka and Mumbai region show less diversity within population.","PeriodicalId":21082,"journal":{"name":"Research in Biotechnology","volume":"3 1","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2016-02-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"5","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Research in Biotechnology","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.19071/RIB.2016.V7.2818","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 5

Abstract

Withania somnifera is commonly known as Indian Ginseng or Ashwagandha which is listed highly medicinal plant in Ayurveda for its wide range of medicinal use. Genetic diversity among 16 genotypes of Withania somnifera collected from four different regions viz. Lucknow, Nimuch, Karnataka and Mumbai was studied using RAPD and ISSR techniques. The ISSR and RAPD together produced 89 bands across 16 genotypes of W. somnifera of which 39 were polymorphic showing 47.89% polymorphism. Over 99% of the RAPD and ISSR fragments were reproducible in the present experiment. There was 90% uniformity within the population. The neighbor joining tree also confirmed a clear grouping and differentiation based on populations of origin i.e. samples were grouped on the basis of their regions of origin. The dendrogram reveals that outgroup of W. somnifera Karnataka origin are evolutionarily related to W. somnifera Nimuch group varieties and W. somnifera Lucknow and Mumbai group varieties are evolutionarily closely related. Within population analysis of Lucknow and Nimuch location showed two sub groups of two lines each showing slight diversity. Plants from Karnataka and Mumbai region show less diversity within population.
利用RAPD和ISSR标记评价印度人参、苦参的遗传多样性
Withania somnifera通常被称为印度人参或Ashwagandha,因其广泛的药用用途而被列为阿育吠陀的高度药用植物。利用RAPD和ISSR技术对从印度勒克瑙、尼穆克、卡纳塔克邦和孟买4个不同地区采集的16种Withania somnifera的遗传多样性进行了研究。ISSR和RAPD共鉴定出16个基因型的89个条带,其中39个为多态性,多态性率为47.89%。在本实验中,超过99%的RAPD和ISSR片段是可重复的。在人群中有90%的一致性。邻居连接树也证实了基于原始种群的明确分组和分化,即样本根据其原始区域分组。树状图显示,印度甘露(W. somnifera Karnataka)产地的外群与印度甘露(W. somnifera Nimuch)群的进化亲缘关系较近,印度甘露(W. somnifera Lucknow)和印度甘露(W. somnifera Mumbai)群的进化亲缘关系较近。在种群分析中,勒克瑙和尼穆克的两个亚群各有两个品系,各表现出轻微的多样性。卡纳塔克邦和孟买地区的植物种群多样性较低。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
自引率
0.00%
发文量
0
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信