Study of the Genetic Diversity of Some Wild Sunflower Species Using ISSR Markers

IF 0.9 4区 农林科学 Q3 AGRONOMY
E. Conțescu, F. G. Anton
{"title":"Study of the Genetic Diversity of Some Wild Sunflower Species Using ISSR Markers","authors":"E. Conțescu, F. G. Anton","doi":"10.59665/rar4004","DOIUrl":null,"url":null,"abstract":"Wild sunflower species are adapted to diverse habitats and possess considerable variability for biotic and abiotic traits, therefore wild germplasm can be a real source for improving the narrow genetic base of the cultivated sunflower crop by introgression of new genes which were previously identified in wild genotypes. In order to effectively exploit these genes in cultivated genotypes, researchers need more information regarding the quantity and distribution of the genetic variability available within the wild sunflower species, which can offer a multitudine of valuable traits for traditional or molecular breeding. This study was conducted to reveal the genetic diversity of wild and cultivated sunflower genotypes using ISSR markers. From a total of 19 ISSR markers, which were used to evaluate the genetic diversity, eight markers (UBC808, UBC823, UBC834, UBC836, UBC840, UBC845, UBC853, 17899A) clearly differentiated the wild sunflower genotypes from the wild sunflower and/or the cultivated sunflower. The primers amplified a total of 120 alleles ranging from 10 to 22 alleles per marker. A wide range of fragment length was detected among the accessions, from 140 to over 1500 bp. The neighbor-joining dendrogram, based on Rogers genetic distance, of the genotypes studied consisted of two main clusters of different sizes: five entries were grouped into cluster A and the remaining six entries were grouped into cluster B. It is interesting that genotypes of Helianthus anuus L., Helianthus maximiliani and Helianthus argophyllus were clustered together. Another aspect observed, refers to interspecific variability for Helianthus debilis genotypes. Regarding the PCA, the first two principal axes accounted for 26.8% (CP1) and 16.1% (CP2) of the total variation, respectively, together explaining 42.9% of the total variability. In the future, this molecular genetic information can be combined with morphological and biochemical data to improve the sunflower breeding program.","PeriodicalId":49589,"journal":{"name":"Romanian Agricultural Research","volume":"3 1","pages":""},"PeriodicalIF":0.9000,"publicationDate":"2023-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"1","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Romanian Agricultural Research","FirstCategoryId":"97","ListUrlMain":"https://doi.org/10.59665/rar4004","RegionNum":4,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"AGRONOMY","Score":null,"Total":0}
引用次数: 1

Abstract

Wild sunflower species are adapted to diverse habitats and possess considerable variability for biotic and abiotic traits, therefore wild germplasm can be a real source for improving the narrow genetic base of the cultivated sunflower crop by introgression of new genes which were previously identified in wild genotypes. In order to effectively exploit these genes in cultivated genotypes, researchers need more information regarding the quantity and distribution of the genetic variability available within the wild sunflower species, which can offer a multitudine of valuable traits for traditional or molecular breeding. This study was conducted to reveal the genetic diversity of wild and cultivated sunflower genotypes using ISSR markers. From a total of 19 ISSR markers, which were used to evaluate the genetic diversity, eight markers (UBC808, UBC823, UBC834, UBC836, UBC840, UBC845, UBC853, 17899A) clearly differentiated the wild sunflower genotypes from the wild sunflower and/or the cultivated sunflower. The primers amplified a total of 120 alleles ranging from 10 to 22 alleles per marker. A wide range of fragment length was detected among the accessions, from 140 to over 1500 bp. The neighbor-joining dendrogram, based on Rogers genetic distance, of the genotypes studied consisted of two main clusters of different sizes: five entries were grouped into cluster A and the remaining six entries were grouped into cluster B. It is interesting that genotypes of Helianthus anuus L., Helianthus maximiliani and Helianthus argophyllus were clustered together. Another aspect observed, refers to interspecific variability for Helianthus debilis genotypes. Regarding the PCA, the first two principal axes accounted for 26.8% (CP1) and 16.1% (CP2) of the total variation, respectively, together explaining 42.9% of the total variability. In the future, this molecular genetic information can be combined with morphological and biochemical data to improve the sunflower breeding program.
利用ISSR标记研究野生向日葵的遗传多样性
野生向日葵适应于不同的生境,在生物和非生物性状上具有相当大的可变性,因此野生种质资源可以通过引入以前在野生基因型中发现的新基因来改善栽培向日葵作物狭窄的遗传基础。为了有效地利用这些基因型,研究人员需要更多关于野生向日葵物种遗传变异的数量和分布的信息,这些信息可以为传统或分子育种提供大量有价值的性状。本研究利用ISSR标记揭示了野生向日葵和栽培向日葵基因型的遗传多样性。利用19个ISSR标记进行遗传多样性评价,8个标记(UBC808、UBC823、UBC834、UBC836、UBC840、UBC845、UBC853、17899A)明确区分了野生向日葵与野生向日葵和/或栽培向日葵的基因型。引物共扩增出120个等位基因,每个标记扩增10 ~ 22个等位基因。结果表明,该基因片段长度从140 bp到1500 bp不等。基于罗杰斯遗传距离的相邻联结树形图主要由两个不同大小的集群组成:5个条目被归为集群A,其余6个条目被归为集群b。有趣的是,菊苣、大菱角菊苣和石竹菊苣的基因型都聚集在一起。观察到的另一个方面,是指向日葵基因型的种间变异性。在主成分分析中,前两个主轴分别占总变异量的26.8% (CP1)和16.1% (CP2),合计解释总变异量的42.9%。在未来,这些分子遗传信息可以与形态学和生化数据相结合,以改进向日葵育种计划。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
Romanian Agricultural Research
Romanian Agricultural Research 农林科学-农艺学
CiteScore
0.90
自引率
28.60%
发文量
2
审稿时长
>12 weeks
期刊介绍: The Journal ROMANIAN AGRICULTURAL RESEARCH is an “open access” one, which publishes original articles, short communications, presenting new scientific results – theoretical, experimental and technical – on plant breeding and genetics, physiology, biotechnology, mineral nutrition and plant protection, in field crops. Reviews on up-to date subjects and recent research, preferably from Eastern Europe, may also be published.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信