CEACAM Gene Family: A Circuitous Journey towards Metastasis in Breast Cancer

Waqas Iqbal, Saleh Al-karim, H. M. Ali, K. Saini
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引用次数: 2

Abstract

The ubiquitous up-regulation of CEACAM6 in colon, pancreatic, breast and lung cancer is well established. This protein is known for its invasive and metastatic properties in pancreatic adenocarcinoma as well as in breast cancer. We propose that the overexpression of CEACAM5 and CEACAM6 are a pre-requisite for invasive and metastatic behavior of breast cancer. We have conducted bioinformatics studies to compare the expression profiles of CEA gene family members in sets of RNA-seq data for MCF10A (non-tumorigenic epithelial cell line) and MCF7 (human breast cancer cell line) obtained from European Nucleotide Archives. RNA-seq data was mapped using HISAT2 followed by alignment and abundance analysis using Stringtie and visualized using ballgown package in R software environment. Specifically, we observed a 4.5-fold upregulation in CEACAM5 expression while 7-fold increase was recorded for CEACAM6 expression. We propose that the up-regulation of both these proteins in MCF7 cell line compared to MCF10A implicates their inconspicuous role in tumorigenesis, enhanced invasiveness and thus, leading to increased propensity towards breast cancer metastasis. Further studies are required in breast cancer cell lines and appropriate animal models to validate these in silico observations.
CEACAM基因家族:癌症转移的迂回之旅
CEACAM6在结肠癌、胰腺癌、乳腺癌和肺癌中的普遍上调已得到充分证实。这种蛋白在胰腺癌和癌症中具有侵袭性和转移性。我们认为CEACAM5和CEACAM6的过度表达是癌症侵袭和转移行为的先决条件。我们进行了生物信息学研究,以比较从欧洲核苷酸档案馆获得的MCF10A(非致瘤上皮细胞系)和MCF7(人类癌症细胞系)的RNA-seq数据集中CEA基因家族成员的表达谱。使用HISAT2绘制RNA-seq数据,然后使用Stringtie进行比对和丰度分析,并在R软件环境中使用ballroath包进行可视化。具体而言,我们观察到CEACAM5表达上调4.5倍,而CEACAM6表达上调7倍。我们认为,与MCF10A相比,MCF7细胞系中这两种蛋白的上调表明,它们在肿瘤发生中的作用不明显,增强了侵袭性,从而增加了乳腺癌症转移的倾向。需要对乳腺癌症细胞系和适当的动物模型进行进一步研究,以验证这些计算机观测结果。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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