Multi-Attribute Discriminative Representation Learning for Prediction of Adverse Drug-Drug Interaction

IF 18.6
Jiajing Zhu;Yongguo Liu;Yun Zhang;Zhi Chen;Xindong Wu
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引用次数: 9

Abstract

Adverse drug-drug interaction (ADDI) is a significant life-threatening issue, posing a leading cause of hospitalizations and deaths in healthcare systems. This paper proposes a unified Multi-Attribute Discriminative Representation Learning (MADRL) model for ADDI prediction. Unlike the existing works that equally treat features of each attribute without discrimination and do not consider the underlying relationship among drugs, we first develop a regularized optimization problem based on CUR matrix decomposition for joint representative drug and discriminative feature selection such that the selected drugs and features can well approximate the original feature spaces and the critical factors discriminative to ADDIs can be properly explored. Different from the existing models that ignore the consistent and unique properties among attributes, a Generative Adversarial Network (GAN) framework is then designed to capture the inter-attribute shared and intra-attribute specific representations of adverse drug pairs for exploiting their consensus and complementary information in ADDI prediction. Meanwhile, MADRL is compatible with any kind of attributes and capable of exploring their respective effects on ADDI prediction. An iterative algorithm based on the alternating direction method of multipliers is developed for optimization. Experiments on publicly available dataset demonstrate the effectiveness of MADRL when compared with eleven baselines and its six variants.
预测药物不良反应的多属性判别表示学习
药物不良反应(ADDI)是一个严重的危及生命的问题,是医疗系统住院和死亡的主要原因。本文提出了一种用于ADDI预测的统一多属性判别表示学习(MADRL)模型。不同于现有的作品一视同仁地对待每个属性的特征,并且不考虑药物之间的潜在关系,我们首先开发了一个基于CUR矩阵分解的正则化优化问题,用于联合代表药物和判别特征选择,使得所选择的药物和特征能够很好地逼近原始特征空间,并且可以适当地探索判别ADDIs的关键因素。与忽略属性之间一致性和唯一性的现有模型不同,随后设计了一个生成对抗性网络(GAN)框架,以捕获不良药物对的属性间共享和属性内特定表示,从而在ADDI预测中利用其一致性和互补性信息。同时,MADRL与任何类型的属性都兼容,并且能够探索它们对ADDI预测的各自影响。提出了一种基于乘法器交替方向法的迭代优化算法。在公开数据集上的实验证明了MADRL与11个基线及其6个变体相比的有效性。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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