Confined molecules: experiment meets theory in small spaces.

IF 7.2 2区 生物学 Q1 BIOPHYSICS
Yang Yu, Julius Rebek
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引用次数: 2

Abstract

The behavior of molecules confined to small spaces is fascinating chemistry and lies at the heart of signaling processes in biology. Our approach to confinement is through reversible encapsulation of small molecules in synthetic containers. We show that confinement leads to amplified reactivities in bimolecular reactions, stabilization of otherwise reactive species, and limitation in motions that create new stereochemical arrangements. The isolation of molecules from solvent makes for manageable computations and has stimulated theorist to examine reaction details in the limited space. Transition states for reactions and rearrangements can be calculated, the effects of (de)solvation can be evaluated and the magnetic properties of the containers can be compared with experimental observations. Finally, we outline several potential applications, including entanglement chemistry and the use of isomers in data storage.

受限分子:实验与理论在小空间相遇。
限制在小空间内的分子的行为是令人着迷的化学,也是生物学信号传导过程的核心。我们的方法是将小分子可逆地封装在合成容器中。我们表明,约束导致双分子反应的反应活性增强,其他反应物质的稳定性,以及产生新的立体化学排列的运动的限制。分子与溶剂的分离使计算变得易于管理,并刺激理论家在有限的空间内研究反应的细节。可以计算反应和重排的过渡态,可以评估(脱)溶剂化的影响,并且可以将容器的磁性与实验观察进行比较。最后,我们概述了几种潜在的应用,包括纠缠化学和异构体在数据存储中的应用。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Quarterly Reviews of Biophysics
Quarterly Reviews of Biophysics 生物-生物物理
CiteScore
12.90
自引率
1.60%
发文量
16
期刊介绍: Quarterly Reviews of Biophysics covers the field of experimental and computational biophysics. Experimental biophysics span across different physics-based measurements such as optical microscopy, super-resolution imaging, electron microscopy, X-ray and neutron diffraction, spectroscopy, calorimetry, thermodynamics and their integrated uses. Computational biophysics includes theory, simulations, bioinformatics and system analysis. These biophysical methodologies are used to discover the structure, function and physiology of biological systems in varying complexities from cells, organelles, membranes, protein-nucleic acid complexes, molecular machines to molecules. The majority of reviews published are invited from authors who have made significant contributions to the field, who give critical, readable and sometimes controversial accounts of recent progress and problems in their specialty. The journal has long-standing, worldwide reputation, demonstrated by its high ranking in the ISI Science Citation Index, as a forum for general and specialized communication between biophysicists working in different areas. Thematic issues are occasionally published.
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