Multiple sequence alignment of the M protein in SARS-associated and other known coronaviruses.

Ding-Hua Shi, Hui-Jie Zhou, Bin-Bin Wang, Yan-Hong Gu, Yi-Fei Wang
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引用次数: 2

Abstract

In this paper, we report a multiple sequence alignment result on the basis of 10 amino acid sequences of the M protein, which come from different coronaviruses (4 SARS-associated and 6 others known). The alignment model was based on the profile HMM (Hidden Markov Model), and the model training was implemented through the SAHMM (Self-Adapting Hidden Markov Model) software developed by the authors.

sars相关冠状病毒和其他已知冠状病毒M蛋白的多序列比对
在本文中,我们报告了来自不同冠状病毒的M蛋白的10个氨基酸序列的多序列比对结果(4个与sars相关,6个已知)。对准模型基于隐马尔可夫模型(HMM),模型训练采用自适应隐马尔可夫模型(SAHMM)软件实现。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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