Automated image-analysis method for the quantification of fiber morphometry and fiber type population in human skeletal muscle.

IF 5.3 2区 医学 Q2 CELL BIOLOGY
Perla C Reyes-Fernandez, Baptiste Periou, Xavier Decrouy, Fréderic Relaix, François Jérôme Authier
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引用次数: 26

Abstract

Background: The quantitative analysis of muscle histomorphometry has been growing in importance in both research and clinical settings. Accurate and stringent assessment of myofibers' changes in size and number, and alterations in the proportion of oxidative (type I) and glycolytic (type II) fibers is essential for the appropriate study of aging and pathological muscle, as well as for diagnosis and follow-up of muscle diseases. Manual and semi-automated methods to assess muscle morphometry in sections are time-consuming, limited to a small field of analysis, and susceptible to bias, while most automated methods have been only tested in rodent muscle.

Methods: We developed a new macro script for Fiji-ImageJ to automatically assess human fiber morphometry in digital images of the entire muscle. We tested the functionality of our method in deltoid muscle biopsies from a heterogeneous population of subjects with histologically normal muscle (male, female, old, young, lean, obese) and patients with dermatomyositis, necrotizing autoimmune myopathy, and anti-synthetase syndrome myopathy.

Results: Our macro is fully automated, requires no user intervention, and demonstrated improved fiber segmentation by running a series of image pre-processing steps before the analysis. Likewise, our tool showed high accuracy, as compared with manual methods, for identifying the total number of fibers (r = 0.97, p < 0.001), fiber I and fiber II proportion (r = 0.92, p < 0.001), and minor diameter (r = 0.86, p < 0.001) while conducting analysis in ~ 5 min/sample. The performance of the macro analysis was maintained in pectoral and deltoid samples from subjects of different age, gender, body weight, and muscle status. The output of the analyses includes excel files with the quantification of fibers' morphometry and color-coded maps based on the fiber's size, which proved to be an advantageous feature for the fast and easy visual identification of location-specific atrophy and a potential tool for medical diagnosis.

Conclusion: Our macro is reliable and suitable for the study of human skeletal muscle for research and for diagnosis in clinical settings providing reproducible and consistent analysis when the time is of the utmost importance.

Abstract Image

Abstract Image

Abstract Image

用于人体骨骼肌纤维形态测定和纤维类型种群定量的自动图像分析方法。
背景:肌肉组织形态计量学的定量分析在研究和临床环境中都越来越重要。准确、严格地评估肌纤维大小和数量的变化,以及氧化(I型)和糖酵解(II型)纤维比例的变化,对于适当地研究衰老和病理肌肉,以及肌肉疾病的诊断和随访至关重要。人工和半自动化的方法来评估肌肉形态测量切片是耗时的,局限于一个小的分析领域,并且容易产生偏差,而大多数自动化方法只在啮齿动物肌肉中进行了测试。方法:我们开发了Fiji-ImageJ宏脚本,用于在全肌肉数字图像中自动评估人体纤维形态。我们测试了我们的方法在三角肌活检中的功能,这些活检来自组织学上正常肌肉的异质人群(男性、女性、老年、年轻、瘦弱、肥胖)和皮肌炎、坏死性自身免疫性肌病和抗合成酶综合征肌病患者。结果:我们的宏是完全自动化的,不需要用户干预,并通过在分析前运行一系列图像预处理步骤来改善纤维分割。同样,与手工方法相比,我们的工具在识别纤维总数方面显示出很高的准确性(r = 0.97, p)。结论:我们的宏是可靠的,适用于人类骨骼肌的研究和临床诊断,在时间至关重要的情况下提供可重复性和一致性的分析。
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来源期刊
Skeletal Muscle
Skeletal Muscle CELL BIOLOGY-
CiteScore
9.10
自引率
0.00%
发文量
25
审稿时长
12 weeks
期刊介绍: The only open access journal in its field, Skeletal Muscle publishes novel, cutting-edge research and technological advancements that investigate the molecular mechanisms underlying the biology of skeletal muscle. Reflecting the breadth of research in this area, the journal welcomes manuscripts about the development, metabolism, the regulation of mass and function, aging, degeneration, dystrophy and regeneration of skeletal muscle, with an emphasis on understanding adult skeletal muscle, its maintenance, and its interactions with non-muscle cell types and regulatory modulators. Main areas of interest include: -differentiation of skeletal muscle- atrophy and hypertrophy of skeletal muscle- aging of skeletal muscle- regeneration and degeneration of skeletal muscle- biology of satellite and satellite-like cells- dystrophic degeneration of skeletal muscle- energy and glucose homeostasis in skeletal muscle- non-dystrophic genetic diseases of skeletal muscle, such as Spinal Muscular Atrophy and myopathies- maintenance of neuromuscular junctions- roles of ryanodine receptors and calcium signaling in skeletal muscle- roles of nuclear receptors in skeletal muscle- roles of GPCRs and GPCR signaling in skeletal muscle- other relevant aspects of skeletal muscle biology. In addition, articles on translational clinical studies that address molecular and cellular mechanisms of skeletal muscle will be published. Case reports are also encouraged for submission. Skeletal Muscle reflects the breadth of research on skeletal muscle and bridges gaps between diverse areas of science for example cardiac cell biology and neurobiology, which share common features with respect to cell differentiation, excitatory membranes, cell-cell communication, and maintenance. Suitable articles are model and mechanism-driven, and apply statistical principles where appropriate; purely descriptive studies are of lesser interest.
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