MRF-RFS: A Modified Random Forest Recursive Feature Selection Algorithm for Nasopharyngeal Carcinoma Segmentation.

IF 1.3 4区 医学 Q3 COMPUTER SCIENCE, INFORMATION SYSTEMS
Methods of Information in Medicine Pub Date : 2020-08-01 Epub Date: 2021-02-22 DOI:10.1055/s-0040-1721791
Yuchen Fei, Fengyu Zhang, Chen Zu, Mei Hong, Xingchen Peng, Jianghong Xiao, Xi Wu, Jiliu Zhou, Yan Wang
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引用次数: 1

Abstract

Background: An accurate and reproducible method to delineate tumor margins is of great importance in clinical diagnosis and treatment. In nasopharyngeal carcinoma (NPC), due to limitations such as high variability, low contrast, and discontinuous boundaries in presenting soft tissues, tumor margin can be extremely difficult to identify in magnetic resonance imaging (MRI), increasing the challenge of NPC segmentation task.

Objectives: The purpose of this work is to develop a semiautomatic algorithm for NPC image segmentation with minimal human intervention, while it is also capable of delineating tumor margins with high accuracy and reproducibility.

Methods: In this paper, we propose a novel feature selection algorithm for the identification of the margin of NPC image, named as modified random forest recursive feature selection (MRF-RFS). Specifically, to obtain a more discriminative feature subset for segmentation, a modified recursive feature selection method is applied to the original handcrafted feature set. Moreover, we combine the proposed feature selection method with the classical random forest (RF) in the training stage to take full advantage of its intrinsic property (i.e., feature importance measure).

Results: To evaluate the segmentation performance, we verify our method on the T1-weighted MRI images of 18 NPC patients. The experimental results demonstrate that the proposed MRF-RFS method outperforms the baseline methods and deep learning methods on the task of segmenting NPC images.

Conclusion: The proposed method could be effective in NPC diagnosis and useful for guiding radiation therapy.

MRF-RFS:一种改进的随机森林递归特征选择算法用于鼻咽癌分割。
背景:一种准确、可重复的肿瘤边界划定方法在临床诊断和治疗中具有重要意义。在鼻咽癌(NPC)中,由于软组织表现的高变异性、低对比度和不连续边界等限制,在磁共振成像(MRI)中很难识别肿瘤边缘,这增加了鼻咽癌分割任务的挑战。目的:本研究的目的是开发一种人工干预最少的NPC图像分割半自动算法,同时它也能够以高精度和可重复性描绘肿瘤边缘。方法:本文提出了一种新的NPC图像边缘识别特征选择算法,称为改进随机森林递归特征选择(MRF-RFS)。具体而言,为了获得更具判别性的特征子集进行分割,将改进的递归特征选择方法应用于原始手工特征集。此外,在训练阶段,我们将所提出的特征选择方法与经典随机森林(RF)相结合,充分利用其固有特性(即特征重要性度量)。结果:为了评估分割性能,我们在18例鼻咽癌患者的t1加权MRI图像上验证了我们的方法。实验结果表明,所提出的MRF-RFS方法在NPC图像分割任务上优于基线方法和深度学习方法。结论:该方法可有效诊断鼻咽癌,指导放射治疗。
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来源期刊
Methods of Information in Medicine
Methods of Information in Medicine 医学-计算机:信息系统
CiteScore
3.70
自引率
11.80%
发文量
33
审稿时长
6-12 weeks
期刊介绍: Good medicine and good healthcare demand good information. Since the journal''s founding in 1962, Methods of Information in Medicine has stressed the methodology and scientific fundamentals of organizing, representing and analyzing data, information and knowledge in biomedicine and health care. Covering publications in the fields of biomedical and health informatics, medical biometry, and epidemiology, the journal publishes original papers, reviews, reports, opinion papers, editorials, and letters to the editor. From time to time, the journal publishes articles on particular focus themes as part of a journal''s issue.
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