Multi-modal characterization of metabolic and immune gene clusters in adrenocortical carcinoma treatment.

IF 6.8 1区 医学 Q1 ONCOLOGY
Wenjun Hao, Luhan Yao, Yanlong Wang, Jiayu Wan, Yuyan Zhu, Zhihong Dai, Xu Sun, Bo Fan, Yuchao Wang, Hao Xiang, Xiang Gao, Peng Liang, Haolin Zhao, Liang Wang, Ying Wang, Hongyu Wang, Deyong Yang, Zhiyu Liu
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Abstract

Adrenocortical carcinoma (ACC) is an uncommon and aggressive endocrine malignancy, characterized by limited therapeutic options and considerable variability in patient outcomes. The challenge is to combine the complex information of ACC with artificial intelligence (AI) and clinical and pathology data to achieve precision medicine and improve patient prognosis. We developed the Steroid-related Immune Score (SIS) using multi-modal analysis of genomics, digital pathology, and artificial intelligence and validated it in external datasets. In addition, we conducted single-cell RNA sequencing (scRNA-seq) of small samples and in vitro functional experiments. SIS delivered a stable performance with an AUC of 0.8 ± 0.01 in the ResNet50 and Vision Transformer-B16 models. We validated the best model in external ACC cohorts. Using Class Activation Maps (CAMs) technology revealed that SIS was associated with lymphocyte infiltration, establishing it as a new feature in addition to the Weiss scoring system. Patients in the high SIS group responded well to immunotherapy, while the low SIS group showed adaptability to hormone inhibition therapy. Single-cell RNA sequencing data revealed the relationship between the tumor microenvironment and drug resistance in ACC. In vitro functional assays demonstrated that elevated DHCR7 gene expression correlated with unfavorable prognosis and treatment sensitivity, identifying it as a prospective therapeutic target. Furthermore, there are similarities between the metabolic characteristics of ACC and schizophrenia, such as calcium and iron ion levels. Our multi-modal analysis comprehensively characterizes the immune microenvironment of ACC, emphasizing the synergistic regulation of metabolic and immune gene clusters that influence ACC patients' responses to immune and hormone therapies.

肾上腺皮质癌治疗中代谢和免疫基因簇的多模态表征。
肾上腺皮质癌(ACC)是一种罕见的侵袭性内分泌恶性肿瘤,其特点是治疗选择有限,患者预后差异很大。挑战在于将ACC的复杂信息与人工智能(AI)、临床和病理数据相结合,实现精准医疗,改善患者预后。我们利用基因组学、数字病理学和人工智能的多模态分析开发了类固醇相关免疫评分(SIS),并在外部数据集中进行了验证。此外,我们进行了小样本的单细胞RNA测序(scRNA-seq)和体外功能实验。SIS在ResNet50和Vision Transformer-B16型号中提供了稳定的性能,AUC为0.8±0.01。我们在外部ACC队列中验证了最佳模型。使用类激活图(CAMs)技术发现SIS与淋巴细胞浸润有关,将其作为Weiss评分系统之外的新特征。高SIS组患者对免疫治疗反应良好,而低SIS组患者对激素抑制治疗表现出适应性。单细胞RNA测序数据揭示了ACC肿瘤微环境与耐药之间的关系。体外功能分析表明,DHCR7基因表达升高与不良预后和治疗敏感性相关,确定其为潜在的治疗靶点。此外,ACC和精神分裂症的代谢特征有相似之处,如钙和铁离子水平。我们的多模态分析全面表征了ACC的免疫微环境,强调了影响ACC患者对免疫和激素治疗反应的代谢和免疫基因簇的协同调节。
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来源期刊
CiteScore
9.90
自引率
1.30%
发文量
87
审稿时长
18 weeks
期刊介绍: Online-only and open access, npj Precision Oncology is an international, peer-reviewed journal dedicated to showcasing cutting-edge scientific research in all facets of precision oncology, spanning from fundamental science to translational applications and clinical medicine.
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