Complete genome sequence and genome organization of Ficus pumila-associated virus, a new putative member of the family Tymoviridae

IF 2.5 4区 医学 Q3 VIROLOGY
Mengze Guo, Pingping Sun, Xudong Fan, Jianwei Guo, Lei Zhang, Zhengnan Li
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Abstract

Ficus pumila is an edible garden plant with significant medicinal value. In this study, we identified a novel maculavirus associated with mosaic and chlorotic spot symptoms on F. pumila leaves in Yunnan Province, China, and the genome sequence of the virus, which was tentatively named "Ficus pumila-associated virus" (FPaV), was determined. The FPaV genome consists of a single molecule of positive-sense ssRNA that is 6,664 nucleotides in length and has a high cytidine content of 40.8%. The genome exhibits a tymovirus-like organization, encoding a movement protein (MP), a replicase polyprotein, and a coat protein (CP). Phylogenetic analysis showed FPaV to be most closely related to grapevine fleck virus (GFkV), with 67.86% nucleotide sequence identity across the complete genome.

小叶榕相关病毒的全基因组序列和基因组组织——一种被推测为小叶榕科新成员的病毒
无花果是一种具有重要药用价值的可食用园林植物。在本研究中,我们鉴定了一种与中国云南省矮叶榕叶花叶病和绿斑病相关的新型黄斑病毒,并确定了该病毒的基因组序列,暂定名为“矮叶榕相关病毒”(Ficus pumila-associated virus, FPaV)。FPaV基因组由一个单分子正义ssRNA组成,长度为6664个核苷酸,胞苷含量高达40.8%。基因组表现出一种类似于原疹病毒的组织,编码一种运动蛋白(MP)、一种复制酶多蛋白和一种外壳蛋白(CP)。系统发育分析表明,FPaV与葡萄斑病毒(GFkV)亲缘关系最为密切,全基因组核苷酸序列同源性为67.86%。
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来源期刊
Archives of Virology
Archives of Virology 医学-病毒学
CiteScore
5.10
自引率
7.40%
发文量
324
审稿时长
4.5 months
期刊介绍: Archives of Virology publishes original contributions from all branches of research on viruses, virus-like agents, and virus infections of humans, animals, plants, insects, and bacteria. Coverage spans a broad spectrum of topics, from descriptions of newly discovered viruses, to studies of virus structure, composition, and genetics, to studies of virus interactions with host cells, organisms and populations. Studies employ molecular biologic, molecular genetics, and current immunologic and epidemiologic approaches. Contents include studies on the molecular pathogenesis, pathophysiology, and genetics of virus infections in individual hosts, and studies on the molecular epidemiology of virus infections in populations. Also included are studies involving applied research such as diagnostic technology development, monoclonal antibody panel development, vaccine development, and antiviral drug development.Archives of Virology wishes to publish obituaries of recently deceased well-known virologists and leading figures in virology.
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