Sequence Notes: Identification of Two New CRF01_AE/CRF07_BC Recombinants in Men Who Have Sex with Men Populations in Beijing, China.

IF 1.5 4区 医学 Q4 IMMUNOLOGY
Miao Yu, Xiaorui Wang, Lei Jia, Jingwan Han, Hanping Li, Xiaolin Wang, Bohan Zhang, Jingyun Li, Yongjian Liu, Hongling Wen, Lin Li
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引用次数: 0

Abstract

Since HIV-1 is a retrovirus with a high mutation rate and recombination rate, the virus contains a variety of genotypes and recombinants. The men who have sex with men (MSM) population in Beijing has become the main group of HIV transmission, and the co-transmission of multiple HIV-1 subtypes in the same high-risk group has led to the continuous generation of recombinants between various subtypes. In this study, two unique recombinant forms were identified in the samples from Beijing, and the full-length sequences were amplified and sequenced for analysis. Through the construction of phylogenetic trees and recombination breakpoint analysis, the two recombinants were identified as second-generation recombinants composed of CRF01_AE and CRF07_BC. The emergence of more complex recombinant strains poses new challenges to HIV prevention, and it is necessary to focus on monitoring the epidemic in the MSM population.

序列注释:在中国北京男性性行为人群中鉴定出两个新的CRF01_AE/CRF07_BC重组基因。
由于HIV-1是一种具有高突变率和重组率的逆转录病毒,该病毒包含多种基因型和重组体。北京市男男性行为人群(MSM)已成为HIV传播的主要人群,同一高危人群中多种HIV-1亚型的共传播导致各亚型之间的重组基因不断产生。本研究从北京的样品中鉴定出两种独特的重组形式,并对其全长序列进行扩增和测序以供分析。通过构建系统发育树和重组断点分析,确定这两个重组体为由CRF01_AE和CRF07_BC组成的第二代重组体。更复杂的重组病毒株的出现给艾滋病毒预防带来了新的挑战,有必要将重点放在监测男同性恋人群中的流行病上。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
CiteScore
3.10
自引率
6.70%
发文量
201
审稿时长
3-6 weeks
期刊介绍: AIDS Research and Human Retroviruses was the very first AIDS publication in the field over 30 years ago, and today it is still the critical resource advancing research in retroviruses, including AIDS. The Journal provides the broadest coverage from molecular biology to clinical studies and outcomes research, focusing on developments in prevention science, novel therapeutics, and immune-restorative approaches. Cutting-edge papers on the latest progress and research advances through clinical trials and examination of targeted antiretroviral agents lead to improvements in translational medicine for optimal treatment outcomes. AIDS Research and Human Retroviruses coverage includes: HIV cure research HIV prevention science - Vaccine research - Systemic and Topical PreP Molecular and cell biology of HIV and SIV Developments in HIV pathogenesis and comorbidities Molecular biology, immunology, and epidemiology of HTLV Pharmacology of HIV therapy Social and behavioral science Rapid publication of emerging sequence information.
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