Are cell length and volume interchangeable in cell cycle analysis?

IF 3.2 3区 生物学 Q2 BIOPHYSICS
Prathitha Kar, Ariel Amir
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引用次数: 0

Abstract

Cell length has been used as a proxy for cell size in cell cycle modeling studies. A previous study, however, brought into question the validity of this assumption, noting that correlations between cell lengths can be different from those involving cell volume if cell width fluctuations are taken into account. If cell volume is regulated, data analysis involving cell lengths will lead to an incorrect inference of the cell size control mechanism. We used conditional correlation of length variables conditioned upon radius variables to elucidate the underlying volume control mechanism. Using the conditional correlation on previous mother machine datasets measuring lengths at birth and division and the cell radius for multiple cells, we find that the cell volume control strategy is consistent with an adder model. Further, using the conditional correlation, we conclude that measurement noise constitutes a significant portion of the radius variability in the experimental datasets. To conclude, cell length and cell volume can often be used interchangeably owing to small cell width fluctuations.
在细胞周期分析中,细胞长度和体积是否可以互换?
在细胞周期建模研究中,细胞长度一直被用作细胞大小的代表。然而,之前的一项研究对这一假设的有效性提出了质疑,该研究指出,如果考虑到细胞宽度的波动,细胞长度之间的相关性可能不同于细胞体积之间的相关性。如果细胞体积受到调节,涉及细胞长度的数据分析将导致对细胞大小控制机制的错误推断。我们利用以半径变量为条件的长度变量条件相关性来阐明潜在的体积控制机制。通过对以前的母机数据集进行条件相关性分析,测量多个细胞的出生和分裂时的长度以及细胞半径,我们发现细胞体积控制策略与加法器模型一致。此外,利用条件相关性,我们还得出结论,测量噪声在实验数据集中构成了半径变化的重要部分。总之,由于细胞宽度波动较小,细胞长度和细胞体积通常可以互换使用。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Biophysical journal
Biophysical journal 生物-生物物理
CiteScore
6.10
自引率
5.90%
发文量
3090
审稿时长
2 months
期刊介绍: BJ publishes original articles, letters, and perspectives on important problems in modern biophysics. The papers should be written so as to be of interest to a broad community of biophysicists. BJ welcomes experimental studies that employ quantitative physical approaches for the study of biological systems, including or spanning scales from molecule to whole organism. Experimental studies of a purely descriptive or phenomenological nature, with no theoretical or mechanistic underpinning, are not appropriate for publication in BJ. Theoretical studies should offer new insights into the understanding ofexperimental results or suggest new experimentally testable hypotheses. Articles reporting significant methodological or technological advances, which have potential to open new areas of biophysical investigation, are also suitable for publication in BJ. Papers describing improvements in accuracy or speed of existing methods or extra detail within methods described previously are not suitable for BJ.
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