{"title":"Sackin indices for labeled and unlabeled classes of galled trees.","authors":"Michael Fuchs, Bernhard Gittenberger","doi":"10.1007/s00285-025-02205-0","DOIUrl":null,"url":null,"abstract":"<p><p>The Sackin index is an important measure for the balance of phylogenetic trees. We investigate two extensions of the Sackin index to the class of galled trees and two of its subclasses, namely simplex galled trees and normal galled trees, where for all classes we consider both labeled and unlabeled galled trees. In all cases, we show that the mean of the Sackin index for a network which is uniformly sampled from its class is asymptotic to <math><mrow><mi>μ</mi> <msup><mi>n</mi> <mrow><mn>3</mn> <mo>/</mo> <mn>2</mn></mrow> </msup> </mrow> </math> for an explicit constant <math><mi>μ</mi></math> . In addition, we show that the scaled Sackin index converges weakly and with all its moments to the Airy distribution.</p>","PeriodicalId":50148,"journal":{"name":"Journal of Mathematical Biology","volume":"90 4","pages":"42"},"PeriodicalIF":2.2000,"publicationDate":"2025-03-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11933161/pdf/","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Mathematical Biology","FirstCategoryId":"100","ListUrlMain":"https://doi.org/10.1007/s00285-025-02205-0","RegionNum":4,"RegionCategory":"数学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"BIOLOGY","Score":null,"Total":0}
引用次数: 0
Abstract
The Sackin index is an important measure for the balance of phylogenetic trees. We investigate two extensions of the Sackin index to the class of galled trees and two of its subclasses, namely simplex galled trees and normal galled trees, where for all classes we consider both labeled and unlabeled galled trees. In all cases, we show that the mean of the Sackin index for a network which is uniformly sampled from its class is asymptotic to for an explicit constant . In addition, we show that the scaled Sackin index converges weakly and with all its moments to the Airy distribution.
期刊介绍:
The Journal of Mathematical Biology focuses on mathematical biology - work that uses mathematical approaches to gain biological understanding or explain biological phenomena.
Areas of biology covered include, but are not restricted to, cell biology, physiology, development, neurobiology, genetics and population genetics, population biology, ecology, behavioural biology, evolution, epidemiology, immunology, molecular biology, biofluids, DNA and protein structure and function. All mathematical approaches including computational and visualization approaches are appropriate.