New insights in uranium bioremediation by cytochromes of the bacterium G. uraniireducens.

IF 4 2区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY
Alexandre Almeida, David L Turner, Marta A Silva, Carlos A Salgueiro
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Abstract

The bacterium Geotalea uraniireducens, commonly found in uranium-contaminated environments, plays a key role in bioremediation strategies by converting the soluble hexavalent form of uranium (UVI) into less soluble forms (e.g. UIV.). While most of the reduction and concomitant precipitation of uranium occur outside the cells, there have been reports of important reduction processes taking place in the periplasm. In any case, the triheme periplasmic cytochromes are crucial players, either by ensuring an effective interface between the cell´s interior and exterior or by directly participating in the reduction of the metal. Therefore, understanding the functional mechanism of the highly abundant G. uraniireducens' triheme cytochromes is crucial to assist the elucidation on the respiratory pathways in this bacterium. In this work, a detailed functional characterization of the triheme cytochromes PpcA and PpcB from G. uraniireducens was conducted using NMR and visible spectroscopy techniques. Despite sharing high amino acid sequence and structural homology with their counterparts from G. sulfurreducens, the results obtained showed that the heme reduction potential values are less negative, the order of oxidation of the hemes is distinct, and the redox and redox-Bohr network of interactions revealed unprecedented functional mechanisms of the G. uraniireducens cytochromes. In these cytochromes, the reduction potential values of the three heme groups are much more similar, hence covering a narrow range of values, features that facilitate the directional electron flow from the inner membrane, thereby favouring the optimal reduction of uranium.

铀还原细菌(Geotalea uraniireducens)通常存在于铀污染环境中,通过将可溶性六价铀(UVI)转化为溶解度较低的形式(如 UIV),在生物修复战略中发挥着关键作用。虽然铀的大部分还原和沉淀过程都发生在细胞外,但也有报道称重要的还原过程发生在细胞周质中。在任何情况下,细胞质周围的三heme 细胞色素都是至关重要的角色,它们或确保细胞内部和外部之间的有效界面,或直接参与金属的还原。因此,了解高含量的 G. uraniireducens 三heme 细胞色素的功能机制对于阐明该细菌的呼吸途径至关重要。本研究利用核磁共振和可见光谱技术,对乌拉尼瑞杜氏菌的三heme细胞色素 PpcA 和 PpcB 进行了详细的功能表征。尽管它们与来自 G. sulfurreducens 的对应物在氨基酸序列和结构上具有很高的同源性,但研究结果表明,它们的血红素还原电位值较低,血红素的氧化顺序不同,氧化还原和氧化还原-玻尔相互作用网络揭示了 G. uraniireducens 细胞色素前所未有的功能机制。在这些细胞色素中,三个血红素基团的还原电位值更为相似,因此覆盖的数值范围较窄,这些特征有利于电子从内膜定向流动,从而有利于铀的最佳还原。
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来源期刊
Journal of Biological Chemistry
Journal of Biological Chemistry Biochemistry, Genetics and Molecular Biology-Biochemistry
自引率
4.20%
发文量
1233
期刊介绍: The Journal of Biological Chemistry welcomes high-quality science that seeks to elucidate the molecular and cellular basis of biological processes. Papers published in JBC can therefore fall under the umbrellas of not only biological chemistry, chemical biology, or biochemistry, but also allied disciplines such as biophysics, systems biology, RNA biology, immunology, microbiology, neurobiology, epigenetics, computational biology, ’omics, and many more. The outcome of our focus on papers that contribute novel and important mechanistic insights, rather than on a particular topic area, is that JBC is truly a melting pot for scientists across disciplines. In addition, JBC welcomes papers that describe methods that will help scientists push their biochemical inquiries forward and resources that will be of use to the research community.
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