Yohan Chatelain;Loïc Tetrel;Christopher J. Markiewicz;Mathias Goncalves;Gregory Kiar;Oscar Esteban;Pierre Bellec;Tristan Glatard
{"title":"A Numerical Variability Approach to Results Stability Tests and Its Application to Neuroimaging","authors":"Yohan Chatelain;Loïc Tetrel;Christopher J. Markiewicz;Mathias Goncalves;Gregory Kiar;Oscar Esteban;Pierre Bellec;Tristan Glatard","doi":"10.1109/TC.2024.3475586","DOIUrl":null,"url":null,"abstract":"Ensuring the long-term reproducibility of data analyses requires results stability tests to verify that analysis results remain within acceptable variation bounds despite inevitable software updates and hardware evolutions. This paper introduces a numerical variability approach for results stability tests, which determines acceptable variation bounds using random rounding of floating-point calculations. By applying the resulting stability test to \n<italic>fMRIPrep</i>\n, a widely-used neuroimaging tool, we show that the test is sensitive enough to detect subtle updates in image processing methods while remaining specific enough to accept numerical variations within a reference version of the application. This result contributes to enhancing the reliability and reproducibility of data analyses by providing a robust and flexible method for stability testing.","PeriodicalId":13087,"journal":{"name":"IEEE Transactions on Computers","volume":"74 1","pages":"200-209"},"PeriodicalIF":3.6000,"publicationDate":"2024-10-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"IEEE Transactions on Computers","FirstCategoryId":"94","ListUrlMain":"https://ieeexplore.ieee.org/document/10707317/","RegionNum":2,"RegionCategory":"计算机科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"COMPUTER SCIENCE, HARDWARE & ARCHITECTURE","Score":null,"Total":0}
引用次数: 0
Abstract
Ensuring the long-term reproducibility of data analyses requires results stability tests to verify that analysis results remain within acceptable variation bounds despite inevitable software updates and hardware evolutions. This paper introduces a numerical variability approach for results stability tests, which determines acceptable variation bounds using random rounding of floating-point calculations. By applying the resulting stability test to
fMRIPrep
, a widely-used neuroimaging tool, we show that the test is sensitive enough to detect subtle updates in image processing methods while remaining specific enough to accept numerical variations within a reference version of the application. This result contributes to enhancing the reliability and reproducibility of data analyses by providing a robust and flexible method for stability testing.
期刊介绍:
The IEEE Transactions on Computers is a monthly publication with a wide distribution to researchers, developers, technical managers, and educators in the computer field. It publishes papers on research in areas of current interest to the readers. These areas include, but are not limited to, the following: a) computer organizations and architectures; b) operating systems, software systems, and communication protocols; c) real-time systems and embedded systems; d) digital devices, computer components, and interconnection networks; e) specification, design, prototyping, and testing methods and tools; f) performance, fault tolerance, reliability, security, and testability; g) case studies and experimental and theoretical evaluations; and h) new and important applications and trends.