Prevalence of SPOP and IDH Gene Mutations in Prostate Cancer in a Jordanian Population.

IF 2.1 4区 生物学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY
Mohammed S Alorjani, Samir Al Bashir, Basmah Al-Zaareer, Sohaib Al-Khatib, Raed M Al-Zoubi, Bahaa Al-Trad, Manal AbuAlarja, Ayman Alzu'bi, Mohammad Al-Hamad, Khalid Al-Batayneh, Mazhar S Al-Zoubi
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引用次数: 0

Abstract

Speckle-type POZ (SPOP) is described as an essential tumor suppressor factor in gastric cancer, colorectal cancer, and prostate cancer (PCa). SPOP gene mutations were reported in primary human PCa. Isocitrate dehydrogenase-1 (IDH1) oncogene mutations were detected in gliomas, acute myeloid leukemia, some benign and malignant cartilaginous tumors, and only 1% of PCa. This study aimed to investigate the prevalence of mutations of SPOP and IDH1 genes in PCa in the Jordanian population. One hundred formalin-fixed paraffin-embedded tissue samples were collected from patients diagnosed with prostate adenocarcinoma. The obtained specimens were subjected to genomic DNA extraction, PCR amplification, and direct sequencing of exons 4, 5, 6, and 7 of the SPOP gene and exon 6 of the IDH1 gene. SPOP gene mutations were found in 17% of PCa cases, while no mutation was detected in the screened exon 6 of the IDH1 gene. Clinicopathological data demonstrated a strong correlation between prostate-specific antigen (PSA) levels and both Gleason score (GS) and the International Society of Urological Pathology (ISUP) grade group (GG). There was no significant correlation between PSA levels and age (p = 0.816) nor there were significant associations for SPOP mutational status with age (p = 0.659), PSA levels (p = 0.395), GS (p = 0.259), and ISUP GG (p = 0.424) in the tested population. The study found a strong correlation between PSA levels and both GS and ISUP GG. It also identified a high frequency (17%) of SPOP gene mutations in Jordanian Arab PCa patients, mainly in exon 7. No IDH1 mutations were detected in exon 6.

约旦人群前列腺癌中SPOP和IDH基因突变的患病率
斑点型POZ (SPOP)被认为是胃癌、结直肠癌和前列腺癌(PCa)中必不可少的肿瘤抑制因子。SPOP基因突变在原发性人PCa中有报道。异柠檬酸脱氢酶-1 (IDH1)癌基因突变见于胶质瘤、急性髓系白血病、部分良恶性软骨瘤,仅1%的PCa。本研究旨在调查约旦人群PCa中SPOP和IDH1基因突变的流行情况。从诊断为前列腺癌的患者中采集了100例福尔马林固定石蜡包埋组织样本。获得的标本进行基因组DNA提取、PCR扩增,并对SPOP基因的4、5、6、7外显子和IDH1基因的6外显子进行直接测序。在17%的PCa病例中发现SPOP基因突变,而在筛选的IDH1基因6外显子中未检测到突变。临床病理数据显示前列腺特异性抗原(PSA)水平与Gleason评分(GS)和国际泌尿病理学会(ISUP)分级组(GG)之间存在很强的相关性。PSA水平与年龄无显著相关性(p = 0.816), SPOP突变状态与检测人群年龄(p = 0.659)、PSA水平(p = 0.395)、GS (p = 0.259)、ISUP GG (p = 0.424)无显著相关性。该研究发现PSA水平与GS和ISUP GG有很强的相关性,还发现约旦阿拉伯PCa患者中SPOP基因突变的频率很高(17%),主要在外显子7。外显子6未检测到IDH1突变。
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来源期刊
Biochemical Genetics
Biochemical Genetics 生物-生化与分子生物学
CiteScore
3.90
自引率
0.00%
发文量
133
审稿时长
4.8 months
期刊介绍: Biochemical Genetics welcomes original manuscripts that address and test clear scientific hypotheses, are directed to a broad scientific audience, and clearly contribute to the advancement of the field through the use of sound sampling or experimental design, reliable analytical methodologies and robust statistical analyses. Although studies focusing on particular regions and target organisms are welcome, it is not the journal’s goal to publish essentially descriptive studies that provide results with narrow applicability, or are based on very small samples or pseudoreplication. Rather, Biochemical Genetics welcomes review articles that go beyond summarizing previous publications and create added value through the systematic analysis and critique of the current state of knowledge or by conducting meta-analyses. Methodological articles are also within the scope of Biological Genetics, particularly when new laboratory techniques or computational approaches are fully described and thoroughly compared with the existing benchmark methods. Biochemical Genetics welcomes articles on the following topics: Genomics; Proteomics; Population genetics; Phylogenetics; Metagenomics; Microbial genetics; Genetics and evolution of wild and cultivated plants; Animal genetics and evolution; Human genetics and evolution; Genetic disorders; Genetic markers of diseases; Gene technology and therapy; Experimental and analytical methods; Statistical and computational methods.
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