The combined signatures of programmed cell death and immune landscape provide a prognostic and therapeutic biomarker in the hepatocellular carcinoma.

IF 3.8 3区 化学 Q2 CHEMISTRY, MULTIDISCIPLINARY
Frontiers in Chemistry Pub Date : 2024-11-12 eCollection Date: 2024-01-01 DOI:10.3389/fchem.2024.1484310
Wanghu Liu, Yan Huang, Yang Xu, Xuanji Gao, Yifan Zhao, Simin Fan, Yuanzhi Geng, Shajun Zhu
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引用次数: 0

Abstract

Hepatocellular carcinoma (HCC) ranks as the fourth most common cause of mortality globally among all cancer types. Programmed cell death (PCD) is a crucial biological mechanism governing cancer progression, tumor expansion, and metastatic dissemination. Furthermore, the tumor microenvironment (TME) is critical in influencing overall survival (OS) and immune responses to immunotherapeutic interventions. From a multi-omics perspective, the combination of PCD and TME could help to predict the survival of HCC patient survival and immunotherapy response. Our study analyzed variations in the PCD- and TME-classifier used in the classification of HCC patients into two subgroups: PCD high-TME low and PCD low-TME high. In the following step, we compared the tumor somatic mutation (TMB), immunotherapy response, and functional annotation of both groups of patients. Lastly, Western Blot (WB) were conducted. The immunohistochemistry (IHC) was performed on the Human Protein Atlas (HPA). In the PCD-TME classifier, 23 PCD-related genes and three immune cell types were identified. Patients' prognoses and responses to therapy could be accurately predicted using this model. The findings of this study provide a new instrument for the clinical management of HCC patients, and they contribute to the development of accurate treatment strategies for these patients.

程序性细胞死亡和免疫景观的综合特征为肝细胞癌的预后和治疗提供了生物标志物。
在所有癌症类型中,肝细胞癌(HCC)是全球第四大常见死因。程序性细胞死亡(PCD)是制约癌症进展、肿瘤扩张和转移扩散的重要生物学机制。此外,肿瘤微环境(TME)在影响总生存率(OS)和免疫治疗干预的免疫反应方面也至关重要。从多组学的角度来看,PCD和TME的结合有助于预测HCC患者的生存和免疫治疗反应。我们的研究分析了用于将 HCC 患者分为两个亚组的 PCD 和 TME 分类器的变化:PCD高TME低和PCD低TME高。接下来,我们比较了两组患者的肿瘤体细胞突变(TMB)、免疫治疗反应和功能注释。最后,我们进行了免疫印迹(Western Blot,WB)。免疫组化(IHC)在人类蛋白质图谱(HPA)上进行。在 PCD-TME 分类器中,确定了 23 个 PCD 相关基因和三种免疫细胞类型。利用该模型可以准确预测患者的预后和对治疗的反应。这项研究的结果为HCC患者的临床治疗提供了一种新的手段,有助于为这些患者制定准确的治疗策略。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Frontiers in Chemistry
Frontiers in Chemistry Chemistry-General Chemistry
CiteScore
8.50
自引率
3.60%
发文量
1540
审稿时长
12 weeks
期刊介绍: Frontiers in Chemistry is a high visiblity and quality journal, publishing rigorously peer-reviewed research across the chemical sciences. Field Chief Editor Steve Suib at the University of Connecticut is supported by an outstanding Editorial Board of international researchers. This multidisciplinary open-access journal is at the forefront of disseminating and communicating scientific knowledge and impactful discoveries to academics, industry leaders and the public worldwide. Chemistry is a branch of science that is linked to all other main fields of research. The omnipresence of Chemistry is apparent in our everyday lives from the electronic devices that we all use to communicate, to foods we eat, to our health and well-being, to the different forms of energy that we use. While there are many subtopics and specialties of Chemistry, the fundamental link in all these areas is how atoms, ions, and molecules come together and come apart in what some have come to call the “dance of life”. All specialty sections of Frontiers in Chemistry are open-access with the goal of publishing outstanding research publications, review articles, commentaries, and ideas about various aspects of Chemistry. The past forms of publication often have specific subdisciplines, most commonly of analytical, inorganic, organic and physical chemistries, but these days those lines and boxes are quite blurry and the silos of those disciplines appear to be eroding. Chemistry is important to both fundamental and applied areas of research and manufacturing, and indeed the outlines of academic versus industrial research are also often artificial. Collaborative research across all specialty areas of Chemistry is highly encouraged and supported as we move forward. These are exciting times and the field of Chemistry is an important and significant contributor to our collective knowledge.
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