{"title":"Effects of hypoxia on survival, apoptosis, and the transcriptome of the Chinese yellow pond turtle (Mauremys mutica).","authors":"Lingjing Wei, Congyan Yu, Shan Xiao, Kang Liu, Yudian Lu, Baojiang Gan, Peng Zhu, Sheng Zhang","doi":"10.1016/j.gene.2024.149120","DOIUrl":null,"url":null,"abstract":"<p><p>Mauremys mutica is a widely cultured pond turtle in China that can hold its breath underwater for up to 7 h. However, the adaptive mechanism of this hypoxia-resistant phenotype remains unknown. In the present study, no M. mutica died until 6 h of hypoxic stress. Inflammation was observed in the lungs of dead individuals along with a lung cell apoptosis rate of 12.3% in the death group, which was about six times that of the survival group. Transcriptome sequencing produced 379,659,748 clean reads, and 38,981 genes were obtained. A total of 1566, 1555 and 756 differentially expressed genes (DEGs) were detected between the survival group and the death group, the survival group and the control group, and the death group and the control group, respectively. And the DEGs were enriched in the inflammation, apoptosis, sugar transport, antioxidant, fructose, and mannose metabolism, arginine and proline metabolism, glycosaminoglycan biosynthesis, P53, and MAPK signaling pathways. This study offers new insight into the molecular mechanisms occurring in the lungs of M. mutica during acute hypoxia, which may facilitate genetic selection for hypoxia-resistant lines inM. mutica.</p>","PeriodicalId":12499,"journal":{"name":"Gene","volume":" ","pages":"149120"},"PeriodicalIF":2.6000,"publicationDate":"2024-11-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Gene","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1016/j.gene.2024.149120","RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"GENETICS & HEREDITY","Score":null,"Total":0}
引用次数: 0
Abstract
Mauremys mutica is a widely cultured pond turtle in China that can hold its breath underwater for up to 7 h. However, the adaptive mechanism of this hypoxia-resistant phenotype remains unknown. In the present study, no M. mutica died until 6 h of hypoxic stress. Inflammation was observed in the lungs of dead individuals along with a lung cell apoptosis rate of 12.3% in the death group, which was about six times that of the survival group. Transcriptome sequencing produced 379,659,748 clean reads, and 38,981 genes were obtained. A total of 1566, 1555 and 756 differentially expressed genes (DEGs) were detected between the survival group and the death group, the survival group and the control group, and the death group and the control group, respectively. And the DEGs were enriched in the inflammation, apoptosis, sugar transport, antioxidant, fructose, and mannose metabolism, arginine and proline metabolism, glycosaminoglycan biosynthesis, P53, and MAPK signaling pathways. This study offers new insight into the molecular mechanisms occurring in the lungs of M. mutica during acute hypoxia, which may facilitate genetic selection for hypoxia-resistant lines inM. mutica.
期刊介绍:
Gene publishes papers that focus on the regulation, expression, function and evolution of genes in all biological contexts, including all prokaryotic and eukaryotic organisms, as well as viruses.