A quick guide to the calcium-dependent protein kinase family in Brassica napus.

IF 2.3 3区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY
Genome Pub Date : 2024-11-05 DOI:10.1139/gen-2024-0053
Virginia Natali Miguel, Jacqueline Monaghan
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引用次数: 0

Abstract

Brassica napus, commonly known as rapeseed or canola, is an economically valuable oilseed crop grown throughout Canada that currently faces several challenges due to industrial farming practices as well as a changing climate. Calcium-dependent protein kinases (CDPKs) are key regulators of stress signaling in multiple plant species. CDPKs sense changes in cellular calcium levels via a calmodulin-like domain and are able to respond to these changes via their protein kinase domain. In this mini-review, we provide a quick guide to BnaCDPKs. We present an updated phylogeny of the BnaCDPK family in relation to CDPKs from Arabidopsis thaliana and Oryza sativa and we provide a standardized nomenclature for the large BnaCDPK family that contains many co-orthologs. We analyze expression patterns of BnaCDPKs across tissue types and in response to abiotic and biotic stresses, and we summarize known functions of BnaCDPKs. We hope this guide is useful to anyone interested in exploring the prospect of harnessing the potential of BnaCDPKs in the generation of elite cultivars of B. napus.

油菜钙依赖性蛋白激酶家族快速指南。
芸苔属植物,俗称油菜籽或菜籽,是一种经济价值极高的油料作物,在加拿大各地均有种植,但由于工业化耕作方式以及气候的变化,它目前面临着一些挑战。钙依赖性蛋白激酶(CDPKs)是多种植物物种胁迫信号的关键调节因子。CDPKs 通过钙调蛋白样结构域感知细胞钙水平的变化,并通过其蛋白激酶结构域对这些变化做出反应。在这篇微型综述中,我们提供了有关 BnaCDPKs 的快速指南。我们介绍了 BnaCDPK 家族与拟南芥和黑麦草 CDPK 的最新系统发生关系,并为包含许多同源物的 BnaCDPK 大家族提供了标准化命名法。我们分析了 BnaCDPKs 在不同组织类型中的表达模式以及对非生物和生物胁迫的响应,并总结了 BnaCDPKs 的已知功能。我们希望本指南对有兴趣探索利用 BnaCDPKs 的潜力培育油菜优良品种的人有所帮助。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Genome
Genome 生物-生物工程与应用微生物
CiteScore
5.30
自引率
3.20%
发文量
42
审稿时长
6-12 weeks
期刊介绍: Genome is a monthly journal, established in 1959, that publishes original research articles, reviews, mini-reviews, current opinions, and commentaries. Areas of interest include general genetics and genomics, cytogenetics, molecular and evolutionary genetics, developmental genetics, population genetics, phylogenomics, molecular identification, as well as emerging areas such as ecological, comparative, and functional genomics.
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