Deciphering Aflatoxin B1 affected critical molecular pathways governing cancer: A bioinformatics study using CTD and PANTHER databases.

IF 2.6 4区 医学 Q2 MYCOLOGY
Ankita Kapri, Dheer Singh, Suneel Kumar Onteru
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Abstract

Aflatoxin B1 (AFB1) is a fungal toxin consistently found as a contaminant in food products such as cereals, nuts, spices, and oilseeds. AFB1 exposure can lead to hepatotoxicity, cancer, immune suppression, reproductive deficiency, nutritional dysfunction, and growth impairment. AFB1 has also been listed as one of the most potent human carcinogens by the International Agency for Research on Cancer. Although the correlation between AFB1 exposure and cancer initiation and progression is already reported in the literature, very little information is available about what molecular pathways are affected during cancer development. Considering this, we first selected AFB1-responsive genes involved in five deadliest cancer types including lung, colorectal, liver, stomach, and breast cancers from the Comparative Toxicogenomics Database (CTD). Then, using the PANTHER database, a statistical overrepresentation test was performed to identify the significantly affected pathways in each cancer type. The gonadotropin-releasing hormone receptor (GnRHR) pathway, the CCKR signaling pathway, and angiogenesis were found to be the most affected pathways in lung, breast, liver, and stomach cancers. In addition, AFB1 toxicity majorly impacted apoptosis and Wnt signaling pathways in liver and stomach cancers, respectively. Moreover, the most affected pathways in colorectal cancer were the Wnt, CCKR, and GnRHR pathways. Furthermore, gene analysis was also performed for the most affected pathways associated with each cancer and identified thirteen key genes (e.g., FOS, AKT1) that may serve as biological markers for a particular type of AFB1-induced cancer as well as for in vitro AFB1 toxicological studies using specific cancer cell lines.

解密黄曲霉毒素 B1 对癌症关键分子通路的影响:利用 CTD 和 PANTHER 数据库进行的生物信息学研究。
黄曲霉毒素 B1(AFB1)是一种真菌毒素,经常作为污染物出现在谷物、坚果、香料和油籽等食品中。接触 AFB1 可导致肝中毒、癌症、免疫抑制、生殖缺陷、营养不良和生长障碍。AFB1 还被国际癌症研究机构列为最强烈的人类致癌物质之一。虽然已有文献报道了 AFB1 暴露与癌症的发生和发展之间的相关性,但关于癌症发展过程中哪些分子通路会受到影响的信息却很少。有鉴于此,我们首先从比较毒物基因组学数据库(CTD)中筛选出涉及五种最致命癌症类型(包括肺癌、结直肠癌、肝癌、胃癌和乳腺癌)的 AFB1 反应基因。然后,利用 PANTHER 数据库进行了统计高代表性测试,以确定在每种癌症类型中受到显著影响的通路。结果发现,促性腺激素释放激素受体(GnRHR)通路、CCKR 信号通路和血管生成是肺癌、乳腺癌、肝癌和胃癌中受影响最大的通路。此外,AFB1毒性分别对肝癌和胃癌中的细胞凋亡和Wnt信号通路产生了重大影响。此外,结直肠癌中受影响最大的通路是 Wnt、CCKR 和 GnRHR 通路。此外,还对与每种癌症相关的受影响最大的通路进行了基因分析,确定了 13 个关键基因(如 FOS、AKT1),这些基因可作为 AFB1 诱导的特定类型癌症的生物学标记,也可用于使用特定癌症细胞系进行体外 AFB1 毒理学研究。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Mycotoxin Research
Mycotoxin Research MYCOLOGYTOXICOLOGY-TOXICOLOGY
CiteScore
6.40
自引率
6.70%
发文量
29
期刊介绍: Mycotoxin Research, the official publication of the Society for Mycotoxin Research, is a peer-reviewed, scientific journal dealing with all aspects related to toxic fungal metabolites. The journal publishes original research articles and reviews in all areas dealing with mycotoxins. As an interdisciplinary platform, Mycotoxin Research welcomes submission of scientific contributions in the following research fields: - Ecology and genetics of mycotoxin formation - Mode of action of mycotoxins, metabolism and toxicology - Agricultural production and mycotoxins - Human and animal health aspects, including exposure studies and risk assessment - Food and feed safety, including occurrence, prevention, regulatory aspects, and control of mycotoxins - Environmental safety and technology-related aspects of mycotoxins - Chemistry, synthesis and analysis.
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