Feature Pyramid Network Based Spatial Attention and Cross-Level Semantic Similarity for Diseases Segmentation From Capsule Endoscopy Images

IF 3 4区 计算机科学 Q2 ENGINEERING, ELECTRICAL & ELECTRONIC
Said Charfi, Mohamed EL Ansari, Lahcen Koutti, Ilyas ELjaafari, Ayoub ELLahyani
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引用次数: 0

Abstract

As an emerging technology that uses a pill-sized camera to visualize images of the digestive tract. Wireless capsule endoscopy (WCE) presents several advantages, since it is far less invasive, does not need sedation and has less possible complications compared to standard endoscopy. Hence, it might be exploited as alternative to the standard procedure. WCE is used to diagnosis a variety of gastro-intestinal diseases such as polyps, ulcers, crohns disease, and hemorrhages. Nevertheless, WCE videos produced after a test may consist of thousands of frames per patient that must be viewed by medical specialists, besides, the capsule free mobility and technological limits cause production of a low quality images. Hence, development of an automatic tool based on artificial intelligence might be very helpful. Moreover, most state-of-the-art works aim at images classification (normal/abnormal) while ignoring diseases segmentation. Therefore, in this work a novel method based on Feature Pyramid Network model is presented. This approach aims at diseases segmentation from WCE images. In this model, modules to optimize and combine features were employed. Specifically, semantic and spatial features were mutually compensated by spatial attention and cross-level global feature fusion modules. The proposed method testing F1-score and mean intersection over union are 94.149% and 89.414%, respectively, in the MICCAI 2017 dataset. In the KID Atlas dataset, the method achieved a testing F1-score and mean intersection over union of 94.557% and 90.416%, respectively. Through the performance analysis, the mean intersection over union in the MICCAI 2017 dataset is 20.414%, 18.484%, 11.444%, 8.794% more than existing approaches. Moreover, the proposed scheme surpassed the methods used for comparison by 29.986% and 9.416% in terms of mean intersection over union in KID Atlas dataset. These results indicate that the proposed approach is promising in diseases segmentation from WCE images.

基于特征金字塔网络的空间注意力和跨层语义相似性用于胶囊内窥镜图像的疾病分割
作为一种新兴技术,无线胶囊内窥镜使用药丸大小的摄像头来观察消化道图像。与标准内窥镜检查相比,无线胶囊内窥镜检查(WCE)具有创伤小、无需镇静剂、并发症少等优点。因此,它可以作为标准程序的替代方法。WCE 用于诊断各种胃肠道疾病,如息肉、溃疡、羊角风病和出血。然而,测试后生成的 WCE 视频可能包含每位患者数千帧的图像,必须由医学专家观看,此外,胶囊的自由移动性和技术限制也导致生成的图像质量较低。因此,开发一种基于人工智能的自动工具可能会很有帮助。此外,大多数最先进的工作都以图像分类(正常/异常)为目标,而忽略了疾病分割。因此,本研究提出了一种基于特征金字塔网络模型的新方法。这种方法旨在从 WCE 图像中进行疾病分割。在该模型中,采用了优化和组合特征的模块。具体来说,语义特征和空间特征通过空间注意力和跨级别全局特征融合模块相互补偿。在 MICCAI 2017 数据集中,所提出方法的测试 F1 分数和平均交集超过联合率分别为 94.149% 和 89.414%。在 KID Atlas 数据集中,该方法的测试 F1 分数和平均交叉率分别为 94.557% 和 90.416%。通过性能分析,在 MICCAI 2017 数据集中,该方法的平均交集比联合交集分别高出 20.414%、18.484%、11.444% 和 8.794%。此外,在 KID Atlas 数据集中,拟议方案的平均交集超过联合度的比例分别比用于比较的方法高出 29.986% 和 9.416%。这些结果表明,所提出的方法在从 WCE 图像中进行疾病分割方面大有可为。
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来源期刊
International Journal of Imaging Systems and Technology
International Journal of Imaging Systems and Technology 工程技术-成像科学与照相技术
CiteScore
6.90
自引率
6.10%
发文量
138
审稿时长
3 months
期刊介绍: The International Journal of Imaging Systems and Technology (IMA) is a forum for the exchange of ideas and results relevant to imaging systems, including imaging physics and informatics. The journal covers all imaging modalities in humans and animals. IMA accepts technically sound and scientifically rigorous research in the interdisciplinary field of imaging, including relevant algorithmic research and hardware and software development, and their applications relevant to medical research. The journal provides a platform to publish original research in structural and functional imaging. The journal is also open to imaging studies of the human body and on animals that describe novel diagnostic imaging and analyses methods. Technical, theoretical, and clinical research in both normal and clinical populations is encouraged. Submissions describing methods, software, databases, replication studies as well as negative results are also considered. The scope of the journal includes, but is not limited to, the following in the context of biomedical research: Imaging and neuro-imaging modalities: structural MRI, functional MRI, PET, SPECT, CT, ultrasound, EEG, MEG, NIRS etc.; Neuromodulation and brain stimulation techniques such as TMS and tDCS; Software and hardware for imaging, especially related to human and animal health; Image segmentation in normal and clinical populations; Pattern analysis and classification using machine learning techniques; Computational modeling and analysis; Brain connectivity and connectomics; Systems-level characterization of brain function; Neural networks and neurorobotics; Computer vision, based on human/animal physiology; Brain-computer interface (BCI) technology; Big data, databasing and data mining.
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