Biotechnological potential in agriculture of soil Antarctic microorganisms revealed by omics approach.

IF 4 3区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY
Michel Rodrigo Zambrano Passarini, Marahia Isabel Guevara Robayo, Júlia Ronzella Ottoni, Alysson Wagner Fernandes Duarte, Luiz Henrique Rosa
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Abstract

The biotechnological potential for agricultural applications in the soil in the thawing process on Whalers Bay, Deception Island, Antarctica was evaluated using a metagenomic approach through high-throughput sequencing. Approximately 22.70% of the sequences were affiliated to the phyla of the Bacteria dominion, followed by 0.26% to the Eukarya. Proteobacteria (Bacteria) and Ascomycota (Fungi) were the most abundant phyla. Thirty-two and thirty-six bacterial and fungal genera associated with agricultural biotechnological applications were observed. Streptomyces and Pythium were the most abundant genera related to the Bacteria and Oomycota, respectively. The main agricultural application associated with bacteria was nitrogen affixation; in contrast for fungi, was associated with phytopathogenic capabilities. The present study showed the need to use metagenomic technology to understand the dynamics and possible metabolic pathways associated with the microbial communities present in the soil sample in the process of thawing recovered from the Antarctic continent, which presented potential application in processes of agro-industrial interest.

通过全息方法揭示南极土壤微生物在农业中的生物技术潜力。
通过高通量测序,采用元基因组学方法评估了南极洲欺骗岛捕鲸者湾解冻过程中土壤中农业应用生物技术的潜力。约 22.70% 的序列隶属于细菌门,0.26% 隶属于真核生物。蛋白质细菌(细菌)和子囊菌(真菌)是数量最多的门类。观察到分别有 32 和 36 个细菌属和真菌属与农业生物技术应用有关。链霉菌属(Streptomyces)和腐霉菌属(Pythium)分别是与细菌和卵菌纲有关的最多的菌属。与细菌有关的主要农业应用是固氮;而真菌则与植物病原能力有关。本研究表明,有必要使用元基因组技术来了解从南极大陆采集的解冻过程中土壤样本中微生物群落的动态和可能的代谢途径,这在农业工业过程中具有潜在的应用价值。
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来源期刊
World journal of microbiology & biotechnology
World journal of microbiology & biotechnology 工程技术-生物工程与应用微生物
CiteScore
6.30
自引率
2.40%
发文量
257
审稿时长
2.5 months
期刊介绍: World Journal of Microbiology and Biotechnology publishes research papers and review articles on all aspects of Microbiology and Microbial Biotechnology. Since its foundation, the Journal has provided a forum for research work directed toward finding microbiological and biotechnological solutions to global problems. As many of these problems, including crop productivity, public health and waste management, have major impacts in the developing world, the Journal especially reports on advances for and from developing regions. Some topics are not within the scope of the Journal. Please do not submit your manuscript if it falls into one of the following categories: · Virology · Simple isolation of microbes from local sources · Simple descriptions of an environment or reports on a procedure · Veterinary, agricultural and clinical topics in which the main focus is not on a microorganism · Data reporting on host response to microbes · Optimization of a procedure · Description of the biological effects of not fully identified compounds or undefined extracts of natural origin · Data on not fully purified enzymes or procedures in which they are applied All articles published in the Journal are independently refereed.
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