Qing-Yu Xu, Lei Gao, Dildar Wu, Xin-Yao Li, Yong-Hong Liu, Yao Zhang, Yue-Heng Chen, Ting-Ting She, Bao-Zhu Fang, Wen-Jun Li
{"title":"Aquibaculum sediminis sp. nov., a halotolerant bacteria isolated from salt lake sediment","authors":"Qing-Yu Xu, Lei Gao, Dildar Wu, Xin-Yao Li, Yong-Hong Liu, Yao Zhang, Yue-Heng Chen, Ting-Ting She, Bao-Zhu Fang, Wen-Jun Li","doi":"10.1007/s10482-024-02024-1","DOIUrl":null,"url":null,"abstract":"<div><p>An aerobic, Gram-stain negative bacterium was isolated from sediment samples of Barkol salt lake in Hami City, Xinjiang Uygur Autonomous Region, China, with the number EGI_FJ10229<sup>T</sup>. The strain is ellipse-shaped, oxidase-negative, catalase-positive, and has white, round, smooth, opaque colonies on marine 2216 E agar plate. Growth occurs at 4.0–37.0 ℃ (optimal:30.0 ℃), pH 7.0–9.0 (optimal: pH 8.0) and NaCl concentration of 0–8.0% (optimal: 3.0%). Phylogenetic analysis based on 16S rRNA gene and genome sequences indicated that the isolated strain should be assigned to the genus <i>Aquibaculum</i> and was most closely related to <i>Aquibaculum arenosum</i> CAU 1616<sup> T</sup>. Average nucleotide identity (ANI) and Average amino-acid identity (AAI) values between the type species of the genus <i>Aquibaculum</i> and other related type species were lower than the threshold values recommended for bacterial species. The genomic DNA G + C content of EGI_FJ10229<sup>T</sup> was 65.41%. The major polar lipids were diphosphatidylglycerol, phosphatidylmethylethanolamine, phosphatidylcholine, phosphatidylethanolamine and unidentified phospholipid. The major fatty acids (> 5%) were C<sub>19:0</sub> cyclo <i>ω</i>8<i>c</i> (42.0%) and C<sub>18:1</sub> <i>ω</i>7<i>c</i> (33.78%). The respiratory quinone identified was Q-10. Differential phenotypic and genotypic characteristics of this strain and species of genus <i>Aquibaculum</i> showed that the strain should be classified as representing a new species belonging to this genus, for which the name <i>Aquibaculum sediminis</i> sp. nov. is proposed. The type strain of the proposed novel species is EGI_FJ10229<sup>T</sup> (= KCTC 8570<sup> T</sup> = GDMCC 1.4598<sup> T</sup>).</p></div>","PeriodicalId":50746,"journal":{"name":"Antonie Van Leeuwenhoek International Journal of General and Molecular Microbiology","volume":"118 1","pages":""},"PeriodicalIF":1.8000,"publicationDate":"2024-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Antonie Van Leeuwenhoek International Journal of General and Molecular Microbiology","FirstCategoryId":"99","ListUrlMain":"https://link.springer.com/article/10.1007/s10482-024-02024-1","RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"MICROBIOLOGY","Score":null,"Total":0}
引用次数: 0
Abstract
An aerobic, Gram-stain negative bacterium was isolated from sediment samples of Barkol salt lake in Hami City, Xinjiang Uygur Autonomous Region, China, with the number EGI_FJ10229T. The strain is ellipse-shaped, oxidase-negative, catalase-positive, and has white, round, smooth, opaque colonies on marine 2216 E agar plate. Growth occurs at 4.0–37.0 ℃ (optimal:30.0 ℃), pH 7.0–9.0 (optimal: pH 8.0) and NaCl concentration of 0–8.0% (optimal: 3.0%). Phylogenetic analysis based on 16S rRNA gene and genome sequences indicated that the isolated strain should be assigned to the genus Aquibaculum and was most closely related to Aquibaculum arenosum CAU 1616 T. Average nucleotide identity (ANI) and Average amino-acid identity (AAI) values between the type species of the genus Aquibaculum and other related type species were lower than the threshold values recommended for bacterial species. The genomic DNA G + C content of EGI_FJ10229T was 65.41%. The major polar lipids were diphosphatidylglycerol, phosphatidylmethylethanolamine, phosphatidylcholine, phosphatidylethanolamine and unidentified phospholipid. The major fatty acids (> 5%) were C19:0 cyclo ω8c (42.0%) and C18:1ω7c (33.78%). The respiratory quinone identified was Q-10. Differential phenotypic and genotypic characteristics of this strain and species of genus Aquibaculum showed that the strain should be classified as representing a new species belonging to this genus, for which the name Aquibaculum sediminis sp. nov. is proposed. The type strain of the proposed novel species is EGI_FJ10229T (= KCTC 8570 T = GDMCC 1.4598 T).
期刊介绍:
Antonie van Leeuwenhoek publishes papers on fundamental and applied aspects of microbiology. Topics of particular interest include: taxonomy, structure & development; biochemistry & molecular biology; physiology & metabolic studies; genetics; ecological studies; especially molecular ecology; marine microbiology; medical microbiology; molecular biological aspects of microbial pathogenesis and bioinformatics.