Classification of imbalanced ECGs through segmentation models and augmented by conditional diffusion model

IF 3.5 4区 计算机科学 Q2 COMPUTER SCIENCE, ARTIFICIAL INTELLIGENCE
Jinhee Kwak, Jaehee Jung
{"title":"Classification of imbalanced ECGs through segmentation models and augmented by conditional diffusion model","authors":"Jinhee Kwak, Jaehee Jung","doi":"10.7717/peerj-cs.2299","DOIUrl":null,"url":null,"abstract":"Electrocardiograms (ECGs) provide essential data for diagnosing arrhythmias, which can potentially cause serious health complications. Early detection through continuous monitoring is crucial for timely intervention. The Massachusetts Institute of Technology-Beth Israel Hospital (MIT-BIH) arrhythmia dataset employed for arrhythmia analysis research comprises imbalanced data. It is necessary to create a robust model independent of data imbalances to classify arrhythmias accurately. To mitigate the pronounced class imbalance in the MIT-BIH arrhythmia dataset, this study employs advanced augmentation techniques, specifically variational autoencoder (VAE) and conditional diffusion, to augment the dataset. Furthermore, accurately segmenting the continuous heartbeat dataset into individual heartbeats is crucial for confidently detecting arrhythmias. This research compared a model that employed annotation-based segmentation, utilizing R-peak labels, and a model that utilized an automated segmentation method based on a deep learning model to segment heartbeats. In our experiments, the proposed model, utilizing MobileNetV2 along with annotation-based segmentation and conditional diffusion augmentation to address minority class, demonstrated a notable 1.23% improvement in the F1 score and 1.73% in the precision, compared to the model classifying arrhythmia classes with the original imbalanced dataset. This research presents a model that accurately classifies a wide range of arrhythmias, including minority classes, moving beyond the previously limited arrhythmia classification models. It can serve as a basis for better data utilization and model performance improvement in arrhythmia diagnosis and medical service research. These achievements enhance the applicability in the medical field and contribute to improving the quality of healthcare services by providing more sophisticated and reliable diagnostic tools.","PeriodicalId":54224,"journal":{"name":"PeerJ Computer Science","volume":null,"pages":null},"PeriodicalIF":3.5000,"publicationDate":"2024-09-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"PeerJ Computer Science","FirstCategoryId":"94","ListUrlMain":"https://doi.org/10.7717/peerj-cs.2299","RegionNum":4,"RegionCategory":"计算机科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"COMPUTER SCIENCE, ARTIFICIAL INTELLIGENCE","Score":null,"Total":0}
引用次数: 0

Abstract

Electrocardiograms (ECGs) provide essential data for diagnosing arrhythmias, which can potentially cause serious health complications. Early detection through continuous monitoring is crucial for timely intervention. The Massachusetts Institute of Technology-Beth Israel Hospital (MIT-BIH) arrhythmia dataset employed for arrhythmia analysis research comprises imbalanced data. It is necessary to create a robust model independent of data imbalances to classify arrhythmias accurately. To mitigate the pronounced class imbalance in the MIT-BIH arrhythmia dataset, this study employs advanced augmentation techniques, specifically variational autoencoder (VAE) and conditional diffusion, to augment the dataset. Furthermore, accurately segmenting the continuous heartbeat dataset into individual heartbeats is crucial for confidently detecting arrhythmias. This research compared a model that employed annotation-based segmentation, utilizing R-peak labels, and a model that utilized an automated segmentation method based on a deep learning model to segment heartbeats. In our experiments, the proposed model, utilizing MobileNetV2 along with annotation-based segmentation and conditional diffusion augmentation to address minority class, demonstrated a notable 1.23% improvement in the F1 score and 1.73% in the precision, compared to the model classifying arrhythmia classes with the original imbalanced dataset. This research presents a model that accurately classifies a wide range of arrhythmias, including minority classes, moving beyond the previously limited arrhythmia classification models. It can serve as a basis for better data utilization and model performance improvement in arrhythmia diagnosis and medical service research. These achievements enhance the applicability in the medical field and contribute to improving the quality of healthcare services by providing more sophisticated and reliable diagnostic tools.
通过分割模型和条件扩散模型对不平衡心电图进行分类
心电图(ECG)为诊断心律失常提供了重要数据,而心律失常有可能导致严重的健康并发症。通过持续监测进行早期检测对及时干预至关重要。用于心律失常分析研究的麻省理工学院-以色列贝斯医院(MIT-BIH)心律失常数据集包含不平衡数据。有必要创建一个不受数据不平衡影响的稳健模型,以便对心律失常进行准确分类。为了缓解 MIT-BIH 心律失常数据集中明显的类别不平衡问题,本研究采用了先进的增强技术,特别是变异自动编码器(VAE)和条件扩散技术来增强数据集。此外,准确地将连续心跳数据集分割为单个心跳对于可靠地检测心律失常至关重要。本研究比较了一种利用 R 峰标签进行基于注释的分割的模型和一种利用基于深度学习模型的自动分割方法来分割心跳的模型。在我们的实验中,与使用原始不平衡数据集对心律失常类别进行分类的模型相比,利用 MobileNetV2 以及基于注释的分割和条件扩散增强来解决少数类别问题的拟议模型在 F1 分数和精确度方面分别有 1.23% 和 1.73% 的显著提高。这项研究提出了一种能准确分类各种心律失常(包括少数类别)的模型,超越了以前有限的心律失常分类模型。它可以作为心律失常诊断和医疗服务研究中更好地利用数据和提高模型性能的基础。这些成果提高了在医疗领域的适用性,并通过提供更先进、更可靠的诊断工具,为改善医疗服务质量做出了贡献。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
PeerJ Computer Science
PeerJ Computer Science Computer Science-General Computer Science
CiteScore
6.10
自引率
5.30%
发文量
332
审稿时长
10 weeks
期刊介绍: PeerJ Computer Science is the new open access journal covering all subject areas in computer science, with the backing of a prestigious advisory board and more than 300 academic editors.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信