Etiologic Profile of the Pneumococcus in Ghana: A Systematic Review.

IF 2.6 3区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY
BioMed Research International Pub Date : 2024-08-27 eCollection Date: 2024-01-01 DOI:10.1155/2024/8368996
Reuben E Arhin, Eric S Donkor, Hans-Christian Slotved, Fleischer C N Kotey, Nicholas T K D Dayie
{"title":"Etiologic Profile of the Pneumococcus in Ghana: A Systematic Review.","authors":"Reuben E Arhin, Eric S Donkor, Hans-Christian Slotved, Fleischer C N Kotey, Nicholas T K D Dayie","doi":"10.1155/2024/8368996","DOIUrl":null,"url":null,"abstract":"<p><p><b>Objective:</b> To describe the profile of <i>Streptococcus pneumoniae</i>, identify research gaps, and provide in-depth insights into various aspects related to the pathogen. <b>Methods:</b> Google Scholar, PubMed, and ScienceDirect were searched for all studies on the pneumococcus in Ghana that reported on specimen collected, population and sample size, carriage prevalence, incidence of pneumococcal diseases, age of the study population, types of test performed, serotypes identified, antimicrobial susceptibilities, or molecular analysis on the pneumococci for data extraction. <b>Results:</b> Overall, a total of 7954 results were obtained from the three-database search, and of this, 24 articles were selected after screening. A total of 924 isolates were accounted for by serotyping/serogrouping. The prevalence of pneumococcal carriage in Ghana ranges from 11.0% to 51.4% in the population depending on the age (≤ 24-80 years), sickle cell disease (SCD), human immunodeficiency virus (HIV) status, or health of the study population, and penicillin (Pen)-nonsusceptible isolates ranged from 17% to 63%. The prevalence of pneumococci found as the etiologic agent of diseases among Ghanaians ranges from 3.4% for otitis media to 77.7% for meningitis. Overall, the 13-valent pneumococcal conjugate vaccine (PCV) (PCV-13) carriage serotypes accounted for 28.4% of the reported pneumococcal isolates. PCV-13 invasive serotypes accounted for 22.4% of the reported isolates. The non-PCV-13 carriage serotypes accounted for most (43.9%) of the reported isolates. In the pre-PCV-13 era, the nontypeable (NT) (5.5%) and other nonvaccine types (NVTs) (6.4%) were reported as being predominant. The non-PCV-13 serotypes accounted for 4.4% of the reported isolates in invasive pneumococcal disease (IPD) cases. Multidrug resistance (MDR) ranged from 7.8% to 100%. <b>Conclusion:</b> Predicting the invasiveness of pneumococci using molecular typing is the way to go in the future as this will provide answers to the extent to which capsular switching is contributing to the pneumococcal disease burden in Ghana almost a decade after introducing PCV-13. Continuous monitoring of antibiotic resistance patterns at both phenotypic and genotypic levels, along with serotyping and molecular typing, should be a standard practice in the surveillance of pneumococcal disease burden in Ghana.</p>","PeriodicalId":9007,"journal":{"name":"BioMed Research International","volume":"2024 ","pages":"8368996"},"PeriodicalIF":2.6000,"publicationDate":"2024-08-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11371446/pdf/","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"BioMed Research International","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1155/2024/8368996","RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2024/1/1 0:00:00","PubModel":"eCollection","JCR":"Q3","JCRName":"BIOTECHNOLOGY & APPLIED MICROBIOLOGY","Score":null,"Total":0}
引用次数: 0

Abstract

Objective: To describe the profile of Streptococcus pneumoniae, identify research gaps, and provide in-depth insights into various aspects related to the pathogen. Methods: Google Scholar, PubMed, and ScienceDirect were searched for all studies on the pneumococcus in Ghana that reported on specimen collected, population and sample size, carriage prevalence, incidence of pneumococcal diseases, age of the study population, types of test performed, serotypes identified, antimicrobial susceptibilities, or molecular analysis on the pneumococci for data extraction. Results: Overall, a total of 7954 results were obtained from the three-database search, and of this, 24 articles were selected after screening. A total of 924 isolates were accounted for by serotyping/serogrouping. The prevalence of pneumococcal carriage in Ghana ranges from 11.0% to 51.4% in the population depending on the age (≤ 24-80 years), sickle cell disease (SCD), human immunodeficiency virus (HIV) status, or health of the study population, and penicillin (Pen)-nonsusceptible isolates ranged from 17% to 63%. The prevalence of pneumococci found as the etiologic agent of diseases among Ghanaians ranges from 3.4% for otitis media to 77.7% for meningitis. Overall, the 13-valent pneumococcal conjugate vaccine (PCV) (PCV-13) carriage serotypes accounted for 28.4% of the reported pneumococcal isolates. PCV-13 invasive serotypes accounted for 22.4% of the reported isolates. The non-PCV-13 carriage serotypes accounted for most (43.9%) of the reported isolates. In the pre-PCV-13 era, the nontypeable (NT) (5.5%) and other nonvaccine types (NVTs) (6.4%) were reported as being predominant. The non-PCV-13 serotypes accounted for 4.4% of the reported isolates in invasive pneumococcal disease (IPD) cases. Multidrug resistance (MDR) ranged from 7.8% to 100%. Conclusion: Predicting the invasiveness of pneumococci using molecular typing is the way to go in the future as this will provide answers to the extent to which capsular switching is contributing to the pneumococcal disease burden in Ghana almost a decade after introducing PCV-13. Continuous monitoring of antibiotic resistance patterns at both phenotypic and genotypic levels, along with serotyping and molecular typing, should be a standard practice in the surveillance of pneumococcal disease burden in Ghana.

加纳肺炎球菌的病因概况:系统回顾。
目的:描述肺炎链球菌的概况,找出研究空白,并深入了解与该病原体相关的各个方面。研究方法在 Google Scholar、PubMed 和 ScienceDirect 上搜索加纳所有关于肺炎球菌的研究,这些研究报告包括收集的标本、人群和样本量、携带率、肺炎球菌疾病发病率、研究人群的年龄、进行的检测类型、确定的血清型、抗菌药敏感性或对肺炎球菌的分子分析,以便提取数据。结果:通过三个数据库的检索,共获得 7954 条结果,经过筛选,从中选出 24 篇文章。通过血清分型/同种异体分组,共找到 924 个分离株。根据研究人群的年龄(≤ 24-80 岁)、镰状细胞病(SCD)、人体免疫缺陷病毒(HIV)状态或健康状况,加纳人群中肺炎球菌携带率从 11.0% 到 51.4% 不等,而青霉素(Pen)不敏感分离株的携带率从 17% 到 63% 不等。在加纳人中,肺炎球菌作为病原体的发病率从中耳炎的 3.4% 到脑膜炎的 77.7% 不等。总体而言,13 价肺炎球菌结合疫苗(PCV)(PCV-13)携带血清型占报告的肺炎球菌分离株的 28.4%。PCV-13 侵入性血清型占报告分离株的 22.4%。在报告的分离株中,非 PCV-13 携带血清型占大多数(43.9%)。在 PCV-13 之前的时代,报告的主要是不可分型(NT)(5.5%)和其他非疫苗类型(NVT)(6.4%)。在报告的侵袭性肺炎球菌疾病(IPD)病例分离株中,非 PCV-13 血清型占 4.4%。多重耐药性(MDR)从 7.8% 到 100% 不等。结论利用分子分型预测肺炎球菌的侵袭性是未来的发展方向,因为这将为加纳在引入 PCV-13 近十年后在多大程度上导致了肺炎球菌疾病负担提供答案。在表型和基因型层面持续监测抗生素耐药性模式,同时进行血清分型和分子分型,应成为加纳肺炎球菌疾病负担监测的标准做法。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
BioMed Research International
BioMed Research International BIOTECHNOLOGY & APPLIED MICROBIOLOGY-MEDICINE, RESEARCH & EXPERIMENTAL
CiteScore
6.70
自引率
0.00%
发文量
1942
审稿时长
19 weeks
期刊介绍: BioMed Research International is a peer-reviewed, Open Access journal that publishes original research articles, review articles, and clinical studies covering a wide range of subjects in life sciences and medicine. The journal is divided into 55 subject areas.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信