Molecular characterization of a novel gammapartitivirus infecting the fungus Nigrospora oryzae

IF 2.5 4区 医学 Q3 VIROLOGY
Zhijuan Yang, Baolin Zhang, Yang Hu, Lianjing Zhao, Zengmin Chen, Jie Zhong, Jiaen Su, Yi Chen
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Abstract

Here, we identified a new mycovirus infecting the phytopathogenic fungus Nigrospora oryzae, which we have designated "Nigrospora oryzae partitivirus 2" (NoPV2). The genome of NoPV2 consists of two dsRNA segments (dsRNA 1 and dsRNA 2), measuring 1771 and 1440 bp in length, respectively. dsRNA 1 and dsRNA 2 each contain a single open reading frame (ORF) that encodes the RNA-dependent RNA polymerase (RdRp) and capsid protein (CP), respectively. A BLASTp search showed that the RdRp of NoPV2 had significant sequence similarity to the RdRps of other partitiviruses, including Nigrospora sphaerica partitivirus 1 (75.61% identity) and Magnaporthe oryzae partitivirus 1 (67.53% identity). Phylogenetic analysis revealed that NoPV2 is a new member of the genus Gammapartitivirus in the family Partitiviridae. This study provides important information for understanding the diversity of mycoviruses in N. oryzae.

Abstract Image

Abstract Image

一种感染黑孢子菌的新型伽马巴氏病毒的分子特征。
在这里,我们发现了一种感染植物病原真菌 Nigrospora oryzae 的新型霉菌病毒,并将其命名为 "Nigrospora oryzae partitivirus 2"(NoPV2)。NoPV2 的基因组由两个 dsRNA 片段(dsRNA 1 和 dsRNA 2)组成,长度分别为 1771 和 1440 bp。dsRNA 1 和 dsRNA 2 各包含一个开放阅读框(ORF),分别编码 RNA 依赖性 RNA 聚合酶(RdRp)和囊膜蛋白(CP)。BLASTp 搜索结果表明,NoPV2 的 RdRp 与其他部分病毒的 RdRp 有显著的序列相似性,包括 Nigrospora sphaerica 部分病毒 1(75.61% 的同一性)和 Magnaporthe oryzae 部分病毒 1(67.53% 的同一性)。系统进化分析表明,NoPV2 是部分病毒科 Gammapartitivirus 属的新成员。该研究为了解 N. oryzae 真菌病毒的多样性提供了重要信息。
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来源期刊
Archives of Virology
Archives of Virology 医学-病毒学
CiteScore
5.10
自引率
7.40%
发文量
324
审稿时长
4.5 months
期刊介绍: Archives of Virology publishes original contributions from all branches of research on viruses, virus-like agents, and virus infections of humans, animals, plants, insects, and bacteria. Coverage spans a broad spectrum of topics, from descriptions of newly discovered viruses, to studies of virus structure, composition, and genetics, to studies of virus interactions with host cells, organisms and populations. Studies employ molecular biologic, molecular genetics, and current immunologic and epidemiologic approaches. Contents include studies on the molecular pathogenesis, pathophysiology, and genetics of virus infections in individual hosts, and studies on the molecular epidemiology of virus infections in populations. Also included are studies involving applied research such as diagnostic technology development, monoclonal antibody panel development, vaccine development, and antiviral drug development.Archives of Virology wishes to publish obituaries of recently deceased well-known virologists and leading figures in virology.
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