Automated pipeline processing X-ray diffraction data from dynamic compression experiments on the Extreme Conditions Beamline of PETRA III

IF 6.1 3区 材料科学 Q1 Biochemistry, Genetics and Molecular Biology
Mikhail Karnevskiy, K. Glazyrin, Yuelong Yu, Anshuman Mondal, Carmen Sanchez-Valle, Hauke Marquardt, R. Husband, Earl O'Bannon, C. Prescher, Anton Barty, H. Liermann
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引用次数: 0

Abstract

Presented and discussed here is the implementation of a software solution that provides prompt X-ray diffraction data analysis during fast dynamic compression experiments conducted within the dynamic diamond anvil cell technique. It includes efficient data collection, streaming of data and metadata to a high-performance cluster (HPC), fast azimuthal data integration on the cluster, and tools for controlling the data processing steps and visualizing the data using the DIOPTAS software package. This data processing pipeline is invaluable for a great number of studies. The potential of the pipeline is illustrated with two examples of data collected on ammonia–water mixtures and multiphase mineral assemblies under high pressure. The pipeline is designed to be generic in nature and could be readily adapted to provide rapid feedback for many other X-ray diffraction techniques, e.g. large-volume press studies, in situ stress/strain studies, phase transformation studies, chemical reactions studied with high-resolution diffraction etc.
自动流水线处理 PETRA III 极端条件光束线动态压缩实验的 X 射线衍射数据
本文介绍和讨论的软件解决方案可在动态金刚石砧室技术中进行的快速动态压缩实验期间提供及时的 X 射线衍射数据分析。它包括高效的数据收集、将数据和元数据流传输到高性能集群(HPC)、在集群上进行快速方位数据整合,以及使用 DIOPTAS 软件包控制数据处理步骤和可视化数据的工具。这一数据处理管道对大量研究都非常宝贵。以高压下的氨水混合物和多相矿物集合体的数据采集为例,说明了该管道的潜力。该管道的设计具有通用性,可随时调整,为许多其他 X 射线衍射技术提供快速反馈,例如大体积压制研究、原位应力/应变研究、相变研究、利用高分辨率衍射研究化学反应等。
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来源期刊
CiteScore
10.00
自引率
3.30%
发文量
178
审稿时长
4.7 months
期刊介绍: Many research topics in condensed matter research, materials science and the life sciences make use of crystallographic methods to study crystalline and non-crystalline matter with neutrons, X-rays and electrons. Articles published in the Journal of Applied Crystallography focus on these methods and their use in identifying structural and diffusion-controlled phase transformations, structure-property relationships, structural changes of defects, interfaces and surfaces, etc. Developments of instrumentation and crystallographic apparatus, theory and interpretation, numerical analysis and other related subjects are also covered. The journal is the primary place where crystallographic computer program information is published.
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